KEGG   Brevibacterium sp. BDJS002: PGC08_12780
Entry
PGC08_12780       CDS       T10203                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
breb  Brevibacterium sp. BDJS002
Pathway
breb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:breb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PGC08_12780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:breb03019]
    PGC08_12780
Messenger RNA biogenesis [BR:breb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PGC08_12780
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Phosphatase
Other DBs
NCBI-ProteinID: WCE42024
LinkDB
Position
complement(2767597..2769243)
AA seq 548 aa
MDAEAVRIVALGGLGEVGRNMTVFEYHGKLLIVDCGVLFPEEDQPGVDLILPDFAYLDDR
LDDIVGLVLTHGHEDHIGAVPYLLRRKADIPILGSNLTIALIEAKLKEHRIKPITRVVKE
NDLDQLGPFDLEFVAVNHSIPDALAVFIRTGAGNILHTGDFKMDQLPLDGRITDLRAFAR
LGEEGVDLFMTDSTNAEVPGFTALEKDIGPVLENLFGHAERRVIVASFSSHIHRVQQVLN
AADAHGRKVALVGRSMVRNMKIAEDLGYLEVPRGALIDIKEVDKLPDDQVVLMCTGSQGE
PMAALSRMANRSHRVEVGDGDTVILASSLIPGNENSVFKVINGLMKLGAQVITKADAKIH
VSGHASGGELLYCYNIVKPRGVMPVHGEWRHMLANARHAEATGVNPDNIVLADDGWVVDL
KDGHAEVVGAVDCNFVFVDGSSVGEITEADLKDRLVLSGEGFVTIFMAINSQSKSLIAGP
EIHARGVAESDSVFDSIMPKVTKAVEDALKDGNTDQYQLQQVVRRTVGRWASSKLRRKPM
IVPMVVIV
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggacgcggaagccgtccgcatcgtcgccctcggcggcctcggcgaagtcggccgcaac
atgaccgtgttcgaataccacggcaagctgctcatcgtcgactgcggcgtcctcttcccg
gaggaggatcagcccggcgtcgacctcatccttcccgacttcgcctacctcgacgatcgc
ctcgacgacatcgtcggcctcgtcctcacccacgggcacgaagaccacatcggagccgtg
ccctacctgcttcgccgcaaggccgatatcccgatcctcggttcgaacctgacgatcgct
ctcatcgaggccaagctcaaggaacaccggatcaagccgatcacccgcgtggtcaaggag
aacgacctcgatcagctcggtcccttcgacctcgagttcgtcgccgtcaaccactcgatt
cccgatgctctcgcggtcttcatccgcaccggtgcgggcaacatcctccacaccggcgac
ttcaagatggaccagctcccgctcgacggccggatcacggacctgcgcgccttcgcccgc
ctcggcgaggaaggcgtcgacctgttcatgacggactcgacgaacgcggaggtccccgga
ttcaccgctctggagaaggacatcgggccggttctcgagaacctcttcggtcacgccgag
cgccgggtcatcgtcgcctcattctcctcacacatccaccgcgtccagcaggtgctcaac
gccgcagacgcgcacggtcgcaaggtcgcactcgtcggccgttcgatggtgcgcaacatg
aagatcgccgaagacctcggctaccttgaggtcccgcggggtgctctcatcgacatcaaa
gaggtcgacaaacttcccgatgaccaggtcgtgctcatgtgcaccggttcgcagggtgag
ccgatggcggccctgtcacgcatggccaaccgcagccaccgcgtcgaggtgggcgacggc
gacaccgtcatcctcgcctcctcactcatccccggcaacgagaactccgtgttcaaggtc
atcaacggactgatgaagctgggcgcccaggtgatcaccaaggcagacgccaagatccac
gtgtccggacacgcctccggcggcgagctgctctactgctacaacatcgtcaagccccgc
ggagtcatgcccgtccacggtgaatggcgacacatgctggccaacgccaggcacgccgag
gcgaccggagtgaacccggacaacatcgtcctcgccgacgacggctgggtggtcgacctc
aaggacggccacgccgaggttgttggtgcggtggactgcaacttcgtattcgtcgacggc
tcctcggtcggcgagatcaccgaggcggacctcaaggaccgtctcgtgctctcgggcgaa
ggcttcgtcacgatcttcatggccatcaacagccagtccaagtccctcattgccggtccc
gagatccatgcccgtggtgtggccgagtccgattctgtcttcgactcgatcatgccgaag
gtcacgaaggccgtcgaggatgcactcaaggacggcaacaccgaccagtaccagctgcag
caggtcgtgcgccgcactgtgggacgctgggcgtcctcgaagctgcgtcgcaagccgatg
atcgtccccatggtcgtcatcgtctga

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