Brevibacterium sp. BDJS002: PGC08_13385
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Entry
PGC08_13385 CDS
T10203
Name
(GenBank) helicase-related protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
breb Brevibacterium sp. BDJS002
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breb03019
]
PGC08_13385
Enzymes [BR:
breb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PGC08_13385
Messenger RNA biogenesis [BR:
breb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PGC08_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_19
ParA
UvrD-helicase
RoxA-like_Cyt-c
AAA_11
AAA_30
HA2_N
CON_HrpB
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCE38991
LinkDB
All DBs
Position
2888007..2890715
Genome browser
AA seq
902 aa
AA seq
DB search
MPDSPHFDLHAIAEGLPAAALIDQLASAAVGRFPRLVVEAPPGTGKTTLVPPLIAEHLHD
PGDMPGRIIVTQPRRMAARAGARRLATLTGTRLGEDIGFTVRGESRTSARTRIEFVTTGV
LLARLLRDPELAGVSAVILDEVHERHLDTDLTFALCRELVDLREDLGLIVMSATLDATLW
ARRLGAGDNAGGAESPATLLSVSAQVHPLEVRWAPAKQRPLDARGVTWDFLDHVARTTVD
ALSTHTSGDVLVFAPGAREVEEIASRIARSLPATPATEVHTLLGRTPAKEQDAILKPQAA
EVGRRRVIVSTSVAESALTVPGVSIVVDSGLARGPRLDTRRGMSGLVTTRESKASGTQRA
GRASRLGPGTVYRCLSESDWASLPEHTPAEIATSDLTSAVLTLAVWGGDTDLLPDPMPEG
PYRLAVDNLVALGALEAAEPVQGAGPDQGAGAERDAGAEEASVTVTELGRAIARIPASVW
SARGLFDGAAMLSPAAAAEAIAVIESEQRAPGADLVATLRELRRGKDRRFAQDVKRFAGL
AAEFSNPQDAADQGTADQGSARAGSLSPDDLGLVVALAHPMQIGRLRSSSASEYLLASGT
AATLPRNSSLQGSPWLAISDVGLSGGRAVIRAAVVIDEDTAELAGAGLMATEETATFEQG
KVRAVRRTRLGGIELTATPIKASPELARSAIAASVRQRGAREILRPSEAFEELRSRLGLL
HAVYGTPWPDVRWSQLSQTLTQWCPAALDRVARGADPSRVDLVSALRTLLPWPQASRLDE
LVPVSVEVPSGSRVRLDYPDPDRVDSESDSEQGPVLAVKLQECFGWQTAPSVCEGRVPVV
VHLLSPARRPLAVTSDLASFWANAYSHVRAENRGRYPKHAWPEDPLTAPPMRGTKRSGTM
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccccacacttcgacctccacgccatcgccgagggcctgcccgctgcggca
ctcatcgaccagctggcgagcgcggctgtcggcagattcccccgcctggtcgtcgaggcc
ccgcccggaaccggcaagaccacactggtaccgccgctcattgccgaacaccttcatgat
ccaggggacatgccggggcgaatcatcgtcacccagccacggcgcatggctgcccgggcc
ggcgccaggcggctggcgacgctgacggggacccgcctcggcgaggacatcgggttcacg
gttcgcggagagtcgcggacctctgcgcgcacgcggatcgagttcgtgaccactggagtg
ttgctggctcggctgctgcgcgatcccgagctggcaggtgtctcggcggtcatcctcgat
gaggtgcacgaacgtcacctcgacaccgacctgaccttcgcgttgtgccgggagctcgtc
gatctgcgtgaggaccttggcctcatcgtcatgtcggcgaccctggacgccacgctatgg
gcacgacgtttgggagcaggtgacaatgccggtggggccgagtctccggccacgttgctg
tcggtatccgcccaggtccatcccctcgaggtcaggtgggcacccgcgaagcagcggcct
ctggacgcacgcggagtgacctgggacttcctcgatcatgtggcccgcacaaccgtcgat
gctctctcaacgcacacgagtggggacgtgctcgtcttcgctcccggtgcccgggaggtc
gaggagatcgcctcgcgcatcgcgcggtcccttccagccacaccggcgaccgaggttcac
accctgctcgggcgcacccctgccaaggagcaggatgcgatattgaaaccgcaggccgcc
gaggttggccgacgtcgcgtaatcgtctcgacctcggtcgcggagtcggctctcacggtt
cccggggtgagcatcgtcgtcgattcggggctggctaggggtccccggttggatacgcgg
cgtggaatgtctggtctggtcaccacccgcgagtccaaggcctcgggcacgcagcgtgcc
ggccgtgcctcgcgcttggggcctggcacggtctatcggtgcctgtccgaatctgactgg
gcgagcctgcccgagcacacgccggctgagattgcgacctccgacctcacctcggcggtg
ctgacccttgcggtgtggggtggtgacacggacctgctgccggatccgatgccggagggc
ccctaccgcctggccgtggacaatctcgtggcgcttggggcgctcgaggccgcagaacca
gttcagggtgcaggtccggatcagggtgcgggggctgagcgcgatgcaggcgccgaggag
gcctcggtcacggtcaccgagctgggacgggccatcgcccggattccggcctcggtgtgg
tcagcgcgaggtctcttcgacggagccgcgatgctgtccccggcggctgcggccgaggcg
atcgctgtgatcgaatccgagcagcgtgcccctggtgccgatcttgtggccaccctgcgc
gagctgcggcgcggcaaggaccgtcggttcgctcaagatgtgaagcgcttcgccggtttg
gccgcggagttctcgaacccgcaggatgcagcggatcagggaacagcggatcagggttcg
gcccgggcagggtcactgagtcccgatgacctgggcctcgtcgtcgccctcgcccacccg
atgcagatcggacgactgcgcagctcctcggcctctgagtacctgctggcctcgggcaca
gcggcgacattgccgcggaactcctcgctgcagggaagcccgtggttggcgatctccgat
gtcggcctctctggcgggcgcgctgtgatcagggcggctgtggtcatcgacgaggacacc
gcggaacttgcgggggccgggctgatggcgaccgaggagacggcgacgttcgagcagggc
aaggtccgtgcggtgcgccggacccgcctcggcggcatcgaactcactgccacaccgatc
aaggcgagtccggaattggcccgctcggcgatcgcagcttcggtgcgtcagcgcggagcc
agagagattctgcgacccagtgaggcgttcgaggaactgcgctcgcggctggggctgctg
cacgccgtctatggcacaccgtggccggatgtgcgctggtcacagctgtcacagactctg
acccagtggtgcccggcggccctggaccgggtcgcccgaggagccgatccgagcagggtc
gatcttgtctctgcgctgcggactctcctgccctggccgcaggcgtcgcgcctcgacgag
ctggtgccggtcagtgttgaggtgcccagcggttcccgggttcgcctcgactatcccgat
cccgaccgtgtggactcggaatccgattccgaacaggggcctgtgctcgcggtcaagctc
caggagtgcttcggttggcagactgcgccgagcgtgtgtgagggtcgagtcccggtggtg
gtccacctcctctccccagcccgccgacctctggcggtcaccagcgacctcgcctccttc
tgggccaacgcgtattcccacgtcagagccgagaaccgcggccgttatccgaagcatgcc
tggcccgaggatccgctgacggcacccccgatgcgcgggaccaagcggtctgggacaatg
aagaggtga
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