Brevibacterium sp. BDJS002: PGC08_15455
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Entry
PGC08_15455 CDS
T10203
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PGC08_15455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breb03400
]
PGC08_15455
DNA repair and recombination proteins [BR:
breb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PGC08_15455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
MHC_I_3
DUF7130
Zn_Ribbon_TF
DUF5321
DUF7685
Motif
Other DBs
NCBI-ProteinID:
WCE39382
LinkDB
All DBs
Position
3335903..3336787
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AA seq
294 aa
AA seq
DB search
MRAIWTGSIAFGLVNVPVKLYSATESHDVNMHQVHEKDGGRIRNQHRCQECGKVVEYEDM
VKAYDDGDNRVILTKDDFEALPADENDDLDVLQFVPNDQIDPIMLEKSYFLEPTSKTPKA
YLLLRQTLEDTDRTAIVKLTLRTRTRLAILRVSGKVLMIQTLRWADEIRDVDFKGVNSQA
KISKKELEMSAKLVDSYSEDFTPEEFNDDYQDELRKLIDAKIDKGETLDLEKAFPDEDED
EEPGGDVIDLMEALQKSVDSSRSKKKSSSGSGAKKAGSKKSSSSLKKGETKKTG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatttggaccggatcgattgcgtttgggctcgtcaacgttccggtgaagctg
tattcggccaccgagagccatgacgtcaacatgcaccaggtacatgagaaggacggcggg
cgcatccgcaatcagcaccgttgtcaggagtgcgggaaggtcgtcgagtacgaggatatg
gtcaaggcctacgacgatggcgacaatcgcgtgattctcacgaaggacgatttcgaggcc
ctgcccgccgatgagaatgacgacctcgacgtcctccagttcgtgcccaacgatcagatc
gatcccatcatgctggagaagtcgtacttcctggagccgacgtcgaagacgccgaaggcc
tacctgctgctgcgccagacccttgaagacaccgaccgcacagccatagtgaaactcact
ctgcgtacccgcacacggctggcgatcctgcgagtcagcggaaaagtgctcatgatccag
acgctgcggtgggccgatgagatccgcgacgtggatttcaagggagtgaactcgcaggcg
aagatctccaagaaggaactggagatgtcggccaaactcgtcgactcgtattcggaggac
ttcacgccggaggagttcaacgacgactaccaggacgaactgcgcaaactcatcgatgcc
aagatcgacaagggcgagaccctggacctggagaaggcctttcccgacgaagacgaggac
gaagagcctggcggtgacgtcatcgacctgatggaggctctgcagaagtccgtggacagt
tcgcgctcaaagaagaagagctcgagtggttccggggcgaagaaggccggttcgaagaag
agttcgtcctccttgaagaagggcgaaacgaagaagaccggctaa
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