Brevibacterium sp. BDJS002: PGC08_16080
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Entry
PGC08_16080 CDS
T10203
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03420
Nucleotide excision repair
Brite
Enzymes [BR:
breb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGC08_16080
Transcription machinery [BR:
breb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PGC08_16080
DNA repair and recombination proteins [BR:
breb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PGC08_16080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WCE39501
LinkDB
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Position
3464769..3466403
Genome browser
AA seq
544 aa
AA seq
DB search
MNGPLIVQSDRTVLLESGHPLAVEAAVAIAPFAQLSRTPEYIHTYTITPLGLWNARASGH
DAESVVDVLLEFAKYPVPHELLVDIVDIMDRFGVLTLVDNPIHGLTLTSADTDLLASLIT
QPDLVGKFGKTLDAESVLVHPSERGELKHALLQLGHPVSDHAGYVDGEAHEIALSDDAHG
GQWHLRDYQKEAIDHSLSGESGVVVLPCGAGKTIVGVATMSRVQTTTLILVTNSVAARQW
KDEILARTSLTEDEVGEYSGSTKEIRPITIATYQVLTTRRKGSYLHLELLDAKDWGLVIY
DEVHLLPAPIFRLTASLQARRRLGLTATLVREDGREDEVFSLIGPKQYEVPWKELERMGY
IATASCHEVRVRLDGGTRTAYARADGEDRYRLAATSDAKLPIVRELVADHPKAQILVIGQ
YLDQLEEVGRELDAPVLTGQTPESQRQELFRDFRSGAIPVLVVSKVANFSVDLPAASVAI
QVSGAFGSRQEEAQRLGRILRPKEDSGSATFYTVVAADTVDEHFAAQRRRFLTEQGYSYD
IEVR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtccgttgatcgtgcagtccgaccggactgtgctgttggagtcggggcatccc
ctggccgtcgaggcggctgtggcgatcgcacccttcgcgcagctgtcgcggaccccggaa
tacatccacacgtacacgatcaccccgctggggctgtggaacgcccgggccagcggccat
gacgcggagtccgtcgtcgacgtcctcctcgagttcgcgaagtacccggtgcctcatgag
ctgctcgtcgacatcgtcgacatcatggaccgcttcggcgtgctcaccctcgtcgacaat
ccgatccacggactgaccctgacctcggcagacacggatctgctcgcctcgctcatcacc
cagccggacctggtgggcaagttcggcaaaaccctcgacgccgaatccgtcctcgtccac
ccgtcggagcgcggagagctcaaacatgcgctgctgcagctgggccatccggtctccgac
catgccggctacgtcgacggtgaggcccacgagatcgctttgtccgatgacgcccatggc
gggcagtggcacctgcgtgactatcagaaggaagcgatcgaccattccctcagcggcgag
tccggcgtcgtcgttctgccctgcggtgctggcaagaccatcgtcggagtggccacgatg
tcgcgggtgcagacgacgacgctgatcctcgtgacgaactccgtggccgctcggcagtgg
aaggacgaaatcctcgcgcgcacctcgctgaccgaggacgaggtcggtgagtactcgggg
tcgacgaaggagatccggccgatcaccatcgctacctatcaggtgctgaccacgcgccgc
aaaggctcctacctgcatctcgagctccttgatgccaaggattggggtctggtcatctat
gacgaggtccacctgctgccggcaccgatcttccgtctgaccgcgagcctgcaggccagg
cggcggctcgggcttacggccaccctggtccgtgaggacggacgtgaggacgaggtgttc
tccctcatcgggcccaagcagtacgaggtgccgtggaaggaactcgagcgcatgggctac
atcgccaccgcctcctgccacgaagtccgggtccgcctcgacggaggaacccgcaccgcc
tatgcccgtgccgatggtgaggatcggtaccggctggctgcgacgtcggatgcgaagctg
ccgatcgtgcgtgagctcgtcgccgaccacccgaaggcgcagatcctcgtcatcggccag
tacctcgatcagctcgaagaggtcgggcgcgaactcgacgctcctgtgctgaccggtcag
acgccggaatcgcagcgccaggagctcttccgcgacttccggtccggcgcgatcccggtt
ctcgtggtgtcgaaggtcgcgaacttctccgtcgacctgccggcggcctccgtggcgatc
caggtctcaggtgccttcggctcccggcaggaggaggcccagcgcctgggtcggattctg
cggccgaaggaagactccggatccgcgacgttttacaccgtcgtcgccgccgacaccgtc
gacgagcacttcgccgcccagcgtcgtcgcttcctcaccgagcagggctacagctacgac
atcgaggtccgctga
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integrated database retrieval system
