Balearica regulorum gibbericeps (East African grey crowned-crane): 104629497
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Entry
104629497 CDS
T09009
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104629497 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
breg03041
]
104629497 (PRPF6)
Spliceosome [BR:
breg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104629497 (PRPF6)
Complex C
U5 SnRNP specific factors
104629497 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
T7SS_EccA1_N
ARM_TT21_C
TPR_21
ARM_TT21_5th
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
104629497
NCBI-ProteinID:
XP_010309910
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
ATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQTADDDDEDLNDTNYDEFNGY
AGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSD
LKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQSGENHTSVDPRQ
TQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSG
QTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGK
LQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELET
DIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE
TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINRE
QWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYA
YALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDV
PAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKL
EWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIP
LWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNIANTLMAKAL
QECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWF
HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCDVSKDIENWQK
KIGEILVLVAAKLKNTF
NT seq
2755 nt
NT seq
+upstream
nt +downstream
nt
agccacaggttttaccacccgctccgatattggccctgcacgtgatgcaaatgaccccgt
ggatgatcgtcatgcgccgccggggaagaggactgttggggatcagatgaaaaagaacca
gacagctgatgatgatgatgaagatttgaacgacaccaattatgatgagttcaatgggta
tgctgggagcctgttctcaagtggtccctatgaaaaagatgatgaggaagcagatgctat
ttatgcagctttggataagaggatggatgaacgcagaaaagaaagaagggaacaacgaga
aaaagaggaaatagaaaaatatcgtatggaacgacccaaaattcagcagcagttctcaga
cttgaaacggaagctagcagaggtcacagaagaagagtggctgagtattccagaagttgg
tgatgccaggaacaagcgtcagaggaatcctcgttatgagaagctgactcctgtacccga
cagcttctttgcaaagcatttacagtcaggggagaatcacacttctgtggacccacgcca
aacgcaatttggtggattgaatactccgtacccagggggcttgaacactccgtacccagg
aggtatgacaccaggcttgatgacacctgggacgggcgaattggatatgaggaagattgg
ccaagccaggaacaccttgatggatatgaggctaagccaggtgtcggactctgtgagtgg
ccagactgtagtggacccgaaaggatatttgacagacttgaattcgatgattcccacaca
tggaggagatatcaatgatatcaagaaagcccgtttgctcctgaaatctgtacgagagac
caatcctcatcatccgccagcctggatagcatcagcccgactggaggaggtcactggcaa
actccaagtggctcgaaacctcatcatgaaaggaacggagatgtgccccaagagtgaaga
tgtttggttagaagctgctcggcttcagcctggggatacagccaaggctgttgtggccca
agctgtccgccaccttccgcagtctgtccgaatctatataagagcagcagagctggagac
agatatccgtgcaaagaaacgtgtccttaggaaagcccttgagcatgttccgaattcagt
gcgtttgtggaaagcagctgtggagttagaagaacctgaggatgccaggatcatgctgag
tcgggctgtggagtgctgtccaactagtgttgaactgtggcttgcactggcaaggctgga
gacatatgagaatgctcgtaaagtccttaacaaagcccgtgagaatattccaacagatcg
tcacatctggattactgctgccaaactggaggaagccaatggaaacacccagatggtgga
gaaaattattgacagagccatcacatctcttagggctaatggtgtggaaatcaacagaga
gcaatggatacaggatgccgaggaatgtgataaagctggaagtgtggccacgtgccaggc
tatcatgcgagctgtgattgggattgggattgaggaagaagatcggaaacatacctggat
ggaggatgcagacagttgtgttgctcataatgctctggagtgtgcccgagcgatttatgc
ctacgccttgcaagttttcccgagcaagaagagtgtgtggctgcgagcagcgtactttga
aaagaaccacggaaccagagaatccttggaggctcttttgcagagagctgttgctcactg
tcccaaagcagaagtgctctggctcatgggagccaaatcgaaatggctagcaggagatgt
gccagcagccagaagcattttggcactggctttccaggccaaccccaacagcgaggagat
ctggctggctgccgtgaagctcgagtcagaaaacaatgaatatgaaagagcaaggaggct
gctggcaaaagctcgcagcagtgcccccactgcaagggttttcatgaagtctgtgaagtt
agaatgggtacttgggaacattgctgcagcccaggagctttgtgaggaagccctgaagca
ctatgaggacttccccaaactgtggatgatgaaaggacaaatcgaggaacaaaaagagct
ggtagagaaagcacgagaggcttataatcaagggttgaaaaagtgtccccattccatacc
cctgtggcttttgctgtccaggctggaggagaaagttgggcagttgactagagcaagagc
catcttggaaaagtctcgcctaaagaatccaaagaatccagatctctggttagagtctgt
gcgattagagtacagagctgggctaaagaacattgcaaatactctgatggccaaggcatt
gcaagaatgtcccaattcaggaatcctgtggtcagaggcaattttccttgaagcgcgacc
acaacgaaagaccaagagtgtggacgctctcaagaagtgtgaacatgacccacatgtcct
gttggctgtggccaaactattctggagtgagcgtaaaataaccaaggcccgagagtggtt
ccaccgaaccgtgaagatcgactctgacctgggggatgcttgggctttcttttacaaatt
tgagctccagcatggcacagaggaacaacaagaagaggtgaggaagcgctgtgagaatgc
tgaacctcgccacggagagctgtggtgtgacgtctccaaggacatagagaactggcagaa
aaaaatcggagagattcttgtgcttgtggcagccaagcttaaaaataccttctag
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