Balearica regulorum gibbericeps (East African grey crowned-crane): 104629503
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Entry
104629503 CDS
T09009
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104629503 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
breg03041
]
104629503 (SF3B1)
03036 Chromosome and associated proteins [BR:
breg03036
]
104629503 (SF3B1)
Spliceosome [BR:
breg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104629503 (SF3B1)
Complex B
104629503 (SF3B1)
Complex C
U2 SnRNP specific factors
104629503 (SF3B1)
Chromosome and associated proteins [BR:
breg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104629503 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
104629503
NCBI-ProteinID:
XP_010304348
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
IEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDY
PSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKKHRRMMIISPE
RLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAASQP
PSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSK
IWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET
PRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPG
HIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTA
TPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQK
ERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLV
KVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTM
RPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAI
LMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWK
GIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVK
QCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRI
VDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNG
FGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGH
LGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQE
NCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDV
LATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSF
LFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLN
YVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIY
IGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3878 nt
NT seq
+upstream
nt +downstream
nt
atattgaagcacaaattcgagaaattcaaggaaaaaagcctgctcttgatgaagcacaag
gagtaggccttgattccacaggatattacgatcaagaaatctatggtggcagtgacagca
ggtttgctggatatgtcacttctattgcagcaactgaattggaagatgatgatgatgact
acccatctacaagtttgcttggccagaagaagccaggctaccatgctccagtggcattgc
ttaatgacataccacagtctactgaacagtatgatccttttgcagaacaccgtcctcaaa
agattgcagatcgggaagatgagtacaaaaagcacaggcggatgatgataatttcccctg
agcgtcttgatccttttgcagatggagggaagacaccagatcctaaaatgaatgccagaa
catacatggatgttatgcgtgaacaacatttaacgaaagaagagagggaaattaggcaac
aactagctgaaaaagctaaagctggagagcttaaagtcgtcaatggagccgcatctcagc
caccttcaaaacgcaaacggcgttgggatcagacagctgatcagactcctggtgctacac
ctaaaaaattatccagttgggatcaagcagagactcctggacatacaccatctctgcgat
gggatgaaactccaggccgtgcaaagggtagtgaaactcctggtgccaccccaggctcaa
aaatatgggatccgactcccagtcatacaccagcaggagctgcaacacccggacgggata
cgcctggtcatgcaacaccaggccatggaggtgccacttccagtgcacgtaaaaatcgat
gggatgaaacacctaaaacagagagagatactccggggcacggcagtggatgggctgaga
cgcctcgtacagatagaggtggtgactccattggtgagacaccgaccccaggagctagta
aaagaaagtcacgatgggatgaaacacctgctagccagatgggtggcagcactcctgttc
tgacacctggcaaaacacccattggtacaccagctatgaacatggcaactcctacaccag
gtcatatcatgagcatgactcctgaacagctgcaggcttggcgttgggaaagggaaattg
atgagagaaacagaccactttctgatgaagagttggatgctatgtttccagaaggatata
aggttcttcccccaccagctggttatgtacctattcgcactccagcgcgtaagcttacag
caactccaacgcctttgggtggtatgactggattccacatgcagacagaagaccggacca
tgaagagtgttaatgaccagccatctggcaatcttccattcctaaaaccagatgatatcc
aatactttgataaactgctggttgatgttgatgaatcaactctgagtcctgaagaacaga
aggagagaaaaataatgaaattactcctgaaaataaaaaatggcacacctcctatgagaa
aggctgcgttgcgacaaattactgataaagctcgggaatttggagcagggccgttgttta
atcagattctgcctctgctgatgtcaccaacgcttgaagatcaggagcgtcacttgcttg
tcaaagtcattgacagaattctttacaaactggatgacttggtccgaccatacgtacaca
agatccttgtcgtcattgaacccctgctgattgatgaagactactatgctagagtggaag
gcagggaaattatttcaaacttggctaaggctgctggtttggcaacaatgatctccacaa
tgcgacctgacattgataacatggatgaatatgtccgaaatacaacagctcgagcctttg
ctgtcgttgcctctgctttgggcattccttctctgctacccttcttgaaagctgtctgta
aaagcaaaaaatcctggcaggctaggcatactggcatcaagattgttcagcagattgcta
ttcttatgggttgtgctatcctgcctcatctcaggagcttggttgaaattattgaacatg
gtctggtggatgagcagcagaaagttcgcaccatcagtgctttggctattgctgctttgg
ctgaggcggctactccctatggtatcgagtcatttgattctgttctgaagcctttatgga
agggtatacgtcagcacagaggaaagggtttggctgcctttttgaaggctattggttacc
tgattccactcatggatgctgagtatgcaaactattatactagagaagtcatgctaatcc
ttatcagagagttccagtctcctgatgaagagatgaaaaaaattgtgttgaaggtggtaa
agcagtgttgtggtacggatggtgttgaagcaaactacattaaaacagaaatcttgccac
cttttttcaaacacttctggcagcacagaatggcattggacagaagaaattacagacagt
tggttgatacaactgtggagctggcaaataaagttggagcagcggaaattatttctagaa
ttgtggatgatctgaaagatgaggctgagcagtacagaaaaatggtcatggaaacaattg
agaaaataatgggaaatctgggagcagcagacattgatcataaactggaagaacaactta
ttgatggtatcttgtatgcctttcaggaacagaccacagaggattctgtgatgctgaatg
gttttggcacagtggttaatgctctaggcaaaagagttaaaccctacttgccacaaatct
gtggtacagttttgtggcgtttgaacaacaaatcggctaaagttaggcagcaggctgctg
acctgatctctcgtactgcagttgtcatgaagacttgtcaagaggaaaaactgatgggac
acttgggtgttgtgttgtatgagtacctgggtgaagaatatcctgaagtactgggcagca
tactcggagcacttaaggctattgtgaatgttataggtatgcacaagatgacaccaccaa
tcaaagatctgctgccacggcttacacctattttgaagaacagacatgagaaagtacagg
aaaattgtattgatcttgttgggcgcattgcagaccgaggtgcagagtatgtttctgcaa
gagaatggatgaggatctgctttgaactgcttgaattattaaaagctcacaagaaagcta
tccgaagagccacagtgaacacttttggttatattgcgaaagcaattggacctcacgatg
tattggctacactgctaaataacttgaaagtacaggaaaggcagaacagagtatgcacta
cagtagcaattgctattgtagctgaaacatgctcacctttcacagtgctgcctgcactca
tgaatgaatacagagttccggaactgaatgtccagaatggtgtgttaaaatctctttctt
tcctgtttgaatacattggagagatgggaaaagattacatttatgctgttacaccattgc
ttgaagatgctttaatggacagggatcttgtacacagacaaacagccagtgccgtggtgc
aacacatgtctcttggtgtttatgggtttggctgtgaagattctcttaatcatttgttaa
attatgtgtggcctaacgtgtttgaaacctctcctcacgtcattcaggcagttatggggg
ctctggagggccttagagttgctattggtccctgcagaatgttgcagtattgtttacagg
gtttgtttcaccctgccaggaaagtcagagatgtttattggaagatttataattcgatct
acatcggatcacaggatgctctgatagcacattatccaagaatctataatgatgaaaaga
acacctatattcgttatgaacttgattacatcttataa
DBGET
integrated database retrieval system
