Balearica regulorum gibbericeps (East African grey crowned-crane): 104629910
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Entry
104629910 CDS
T09009
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104629910 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breg03019
]
104629910 (EDC4)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104629910 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104629910 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104629910
NCBI-ProteinID:
XP_010306678
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
SGRTEESLNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQDKQVICL
SGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSN
SYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLF
VWRLAMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHED
RAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVK
FWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKM
WCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEE
GKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAA
GVLIKLFCVHTKALQDVQIRFQPLHSPDMSASMPSHGSHEEFAFPDHMADLSTEGLGSEK
GSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQVSAAPSCSSLFS
LNSIAVSPGSSVSSLTAVTAMSSTSVTDASMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQ
TSPRSHSVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERSPDVISS
ASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPSHHADSMASAASALHLLSPRNRHNS
EHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSP
RDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPV
KDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNHQVTPEFQDELMCILRSQQRELSELR
QNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRVLTEGQQRNGQLQEHLSQ
QLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPVAGQLNNTVATKLAAVEGTLKESI
TKLVKSKNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGT
QEYIQQLETHLKNKKVREQEVRDPLLNQLRQLVSTFQSTTEQLASTIAASVHAEVQHQLH
IIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQ
THILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQL
SSDLGTRTELKLNYLEEAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPA
RRLMIMLQGLVTPGMT
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
tcgggaagaactgaggagtccctgaatgagaaccagagaccgtcaaattcctataacgga
gacctgaatggactgctggtgcctgatcccattgtggctggagatggaccttctttggcg
aagccggtgcatcgcagcatttctttgggagccctgcaggacaagcaagtcatctgcctt
tccggtgatgacagctccacttgcgtagtgatatcagcaaaagatgtggagatagtggcc
agcagcgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacagcct
gttgctagatatgactgggagcagaaatactactatggcaatctgatagctgtttcaaac
tcttacctggcttatgccattagagctgccagtaatggctccgctatggtgcgggtgttg
agcgtcagcactgctgagcggaccttgctgaagggattcacaggcggtgtggcagacctg
gcttttgctcatctcaactccaaccagctggcgtgcctggatgaggccggcaaccttttc
gtctggcgcctggccatggataaagacaaaatccaagaggagatcttggttaacatcaag
cgacctgacaataccccgttgaacacctctcgaagaatcatctggtgccctttcatccca
gatgataatgaggagagcggtgaagagggaagccagacgttggcgttgttgcatgaggac
agggcagaggtgtgggacttggacattatccgaacaaacaacagctcctggccggtggaa
gtgcctagcatcaaagaaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgag
ggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgtcaaa
ttctggcagatctacattgaggggcaagacgagccaaggtgtcttcatgagtggaaaccc
catgatggcaggcctctttcctgcctgctcttctgtgacaaccataaaaaacaagaccca
gaggttcccttctggagatttctcatcacaggagcagatcagaatagagaactgaagatg
tggtgcactgtgtcttggacctgtctgcagaccgtccgcttttctcctgacatcttcagc
tccatgagtattcttcccagcctaaaagtctgcctggacctctctgctgaatatctgata
ctgagtgacgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagaggag
ggtaaagcttacttcagctccatctcggagttcctccttacccacccagtcctcagcttt
ggcatccaggcagtgagccgctgtcggctaaggcacactgaagtgctcccagcagaagag
gaaaatgacaacttgagtgtagaaggtgctcagggagctggggctgttgaatcagcagca
ggcgtcctgataaaactcttctgtgtacacaccaaggccctgcaggatgtgcagattaga
ttccagcctcttcatagtcctgacatgagcgcatccatgccttcccatggctctcatgaa
gaatttgcctttccagaccacatggctgatctaagcacggaagggctgggatctgaaaaa
ggatcggtgcacggctctcaaccagacctgcggcgtatcgctgacctgcctgtaccagca
gacttcctttcactctcaaacgatgccaaacctaagctgatgactccagatgcattcatg
acaccaagtacatccctccaacaggtttctgctgccccttcttgcagctcactcttcagt
ttaaacagtatcgctgtatctccaggcagcagcgtcagttccctgactgcagtcacagcc
atgagtagcacttctgtcacagatgcctctatgcccaggccatcggaagacttgactgtg
agccccaagatgcagctggacaccagcctcacgctgagtagcagtagcagcagtctccag
actagtcctaggagccattcagtccttatcccaggcctccctgacaagctaacaccaaag
gctcctgttccagtcgcaccaggaaactcctctctagcgctggaactgcaggaggtggag
cccttggtggtgccccaagcttctcccacccgtgagcgctctccagacgtcatttcctct
gcttccacagccatgtcccaagatatcccagagattgcttccgagaccttgcaacgcagc
ttcgcggcagctccgtctgggctccctgcggaggtgctggagcccagtcatcacgcagac
agcatggcatccgccgcctcagccttgcatttgctgtctccgaggaacaggcacaattca
gagcacagccaccactctttggacatgcctccagtggaggtggacagactgaatgctcca
tcattgctggagactgctttaactcaggaaaatgcatcttctgacagtgttgtgagtcag
ccgtggccagcagctcctgacataaccagagaaaccaggaacagcatggcagacagccca
agggatgaggttgaagaaaagcacaagagctcttcctatcatcgacacagctaccacctg
ctgcagcatgacagccaggatgctagtgcagaacaaagtgaccatgatgacgaagttgcg
agcttggcttctacgtcaggtggatttggtgccaaagcgtctacgcagaggctgcctgtg
aaggactggaaagccaaggcatccccccgggcttccccaaagctaaagcggaagggcaag
aaagatgacggggatgtgaatcagtcgccaagatcatccaaccaccaggtgacaccggag
ttccaggatgagctgatgtgcatattgaggagccaacagcgggagctctctgagctgcgt
cagaaccagatggagctgctgcagagactcacggatcaccttgatgccatccagagctcc
cttatgggccacgtggagagggtgatcgactcccagcaggagcaggagcagagaagacta
gaccgagtgctgacggaaggacagcagcgcaacgggcagctccaggagcatctgtctcag
cagctttctcagtccctttccaccgctgtgtgtaaccgtctggagaggaccattcgcgag
gagatgaagaagaccgtaccccagtgcatttccaagagcatggaccctgtcgctggccag
ctcaataacactgtcgccaccaagcttgctgctgttgaggggacgctgaaggagagtatc
accaagctagtgaaatcaaagaaccttacagacaccgttgtgagggcaacggccgatacc
ctgcaggggccgatccagtcggcttacagggaagcatttcagagcgtggtgttgccagcc
ttcgagaagagctgccagtccatgttccagcagatcaatgacaccttcaagcagggcacg
caggaatatatccagcagcttgagactcacttgaagaacaagaaggtacgagaacaggag
gtccgggacccgctgctgaatcagcttcggcagctcgtcagcaccttccagagcaccacc
gagcagctggcttccaccatcgcagccagcgtccacgctgaggtccagcatcagctgcac
attatcgtgggcaacatgcaggagtctattttggcccaggtgcagagagtcattaaggga
gaagtgagcctggcgatgaaggaacagcaagcagctgtcacctccagcatcgtccaggca
atgcgctcggcggccgggactccgatcccctctgctcacttggatttccagtctcagcaa
actcatatccttcagctgctccagcagggacacctcaaccaagctttccagcaggctcta
acagcggctgatctcaacctggtcctgtatgtctgtgagactgtggatactcagcaagtg
ttcggacagcatccgtgcccgctgtcccagcctgtgctgctctcgctcattcagcagctc
tcctcggatctgggtactcgtacggagctgaagttgaattacttggaggaagccgtgatg
cacctggaccagagcgaccccatcacccgagaccacatggggtcagtcatgaaccaggtg
cggcagaaactcttccagttcctccaggtggaaccccacaacacgctgagcaagccggcc
cggcgcctcatgatcatgctccagggcctggtcacccccggcatgacttag
DBGET
integrated database retrieval system
