Balearica regulorum gibbericeps (East African grey crowned-crane): 104631751
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Entry
104631751 CDS
T09009
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104631751 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
breg04121
]
104631751 (SLX4)
03400 DNA repair and recombination proteins [BR:
breg03400
]
104631751 (SLX4)
Ubiquitin system [BR:
breg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104631751 (SLX4)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104631751 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
104631751
NCBI-ProteinID:
XP_010300510
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
VHSQGFLVEEDGNAQTCRVLLSDVTGEAVCAFLRYLYAADADIPAGVLPQVGALAARFGV
RELVAKCENNTGESQVSSGVDSEDDLISVRDDKDGEDRAENFQDLLKSMWVGEDEEEEPM
LSPECQKEDDNGVGEQELEEIYEFAATQRRMVQGETEVSEETDCSICSDTEAAQGTNLQT
EEEEVKTSGSASISNSFKDLRDDNDVERSKCDLSAQEDKMQNINRCESVSNPQTTFVPHH
SEPQKWDVASHGATTNEEETVRRCEGVKDSESSQVSHDGADHCEKQFPSFHGDTDINESY
ERLFSATQGDYCEPSPTKEVTKESGKAPSEKHVDVNDSFPYSKSQKDLSPHRNSFYGSPP
PKPYVPLFPAVGSSPASPKSERKFAREHVSTPEQNKKEKSFPTDEISCQKANELDTASRN
ENTVSPAELPDIDLNKRTYVPGLSSPVIRTQDDAAQGKEEGDVIVLSSDDEMELQEDKKL
PESGSALKEREILGQLECTNVEQGPEIPKPEPNSSVTETEQRSTQVSGGITETVYINKGV
KLSTELPLSRQIDACMESKHSPNPSPEKKFSPEVSSGTDSSWLVPDTPVLSKSRSFTTQT
HVTSINSLKSLGSKLSTKKLAAGKSNHEMAGNLIKVCETTLSSKHLPMENSVSERSPPSS
PAAGSFSKNSPPVSPVDPVLLSPGHTNVKSKCAKISFLSKPVPLCHEQSLEDKTNISVVE
VEDSEKEVSLHSVSSSVLLCDEPPIPFDDCWHVEYLSPVRGHSQDSNQVSRAKTSTTSSP
KPGSWHEQWESPVHAEEIKGSTPLPGSPVSRRTTLLCLEKSPIEACSSVGNRPSYLNSKI
WDDWNGEEEEDEFPEMLPLSQRLSAAAGAHQTHPVKTPEPSCQENDKPPSTPMTPMPAYS
IMETPQLKKELSRFGVRALPKRQMVLKLKEIFQYTHQDVDSDFEDEIPSSQPPLRKSPAK
RSRQSKAKQTAGGKRANASRAVGKRKQVATASSVLPVGRADDDLVGPRETGCAAPKEGTK
VTHHPEGAKEQKRSSVSPERWSLAADGEEPILSASQESAVSSVDGSDISFGSQSSFVNGF
EACDFASEEEEEELPASQAAAREEDKLEAVRCYIRSNTALYNKILFYEPIELAALHAELK
QNGIKISKAKLLDFLDAHCITFTTAGARKEKEQKRKGNKKQRKRY
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gttcacagccaagggtttttggtggaggaggatgggaacgcgcagacgtgccgtgtgctg
ctgagtgacgtgacaggagaggcggtgtgtgcgttcctgcgatacctttatgctgctgat
gctgacatccctgctggggtgctgccccaggtgggggctctggctgccaggtttggtgtg
agggaactggtggcaaagtgtgaaaacaacactggagagagtcaggtgtcttctggagtg
gattcagaagatgatcttatctctgtgagggatgacaaagatggtgaggacagagctgag
aacttccaagacctcttgaagtcaatgtgggtgggtgaagatgaggaagaagaacccatg
ctgagccctgaatgccagaaggaagatgacaatggggtgggtgaacaggagctggaggaa
atctatgagtttgctgcaactcagagaaggatggttcaaggtgaaacagaggtgagcgag
gaaacagactgcagcatctgcagtgatactgaggcagcccaaggtacaaacctgcaaact
gaggaggaagaggtaaagacatctggatctgcttcaataagcaacagcttcaaagatctg
agggatgacaatgatgtggaaagatctaaatgtgacttgtctgcacaagaagacaaaatg
cagaatataaataggtgtgagagtgtgagcaatccacagactacttttgtgcctcaccac
agtgaacctcaaaaatgggacgtagcatcccatggtgccaccactaatgaagaagagacc
gttaggagatgtgaaggtgtgaaggattccgagtcatctcaggtctcacatgatggggca
gatcactgtgaaaaacagtttcctagcttccacggtgatactgatataaacgaaagttat
gaacgcttgttttctgcaactcagggagattactgtgagccttccccaacgaaagaagtt
accaaagaatcaggaaaggctcctagcgaaaaacatgttgatgttaatgattcatttccg
tacagcaaatcacaaaaagacctctctccacataggaatagtttttatgggagtcctcct
cccaaaccttatgtgcccctttttcctgctgttggctcttcacctgcatctccaaaatca
gagagaaagtttgccagagaacatgtgtcaacaccagagcaaaacaaaaaggaaaaatca
ttcccaactgacgaaatatcctgtcagaaagccaacgagctggatactgcgtcaagaaat
gagaacacagtttctccagccgagcttcctgacattgatttaaacaagcgcacgtatgtc
ccagggttgtcatcaccagtcatcagaactcaggatgatgcagctcaggggaaggaggag
ggtgatgttattgttttatcttctgatgatgaaatggagttacaagaagacaagaagttg
ccagagtcaggctctgctctgaaagaaagggaaatccttgggcaactggaatgtacaaac
gtagaacaaggtcctgagataccaaaacctgaacctaactcatcagtcactgaaacagag
cagagatctacccaggtctcaggtggcattacagagacagtgtatataaataagggtgta
aagctgtccaccgaattgcctctcagcagacagatagatgcttgtatggagagcaaacac
agtccaaacccgagccctgaaaaaaagttcagtcctgaagtgtcttcgggtacagacagc
tcctggctagtgccagacacaccggttctgagcaaaagcagaagtttcacaacacagact
cacgtcacaagtattaattctttgaagagtctaggatctaaactcagcacaaagaaatta
gcagcagggaagagtaaccatgaaatggctggaaatttaataaaagtttgtgaaacaacg
ttatcaagcaaacatttgcctatggagaactcagtcagtgaaaggagccctcccagcagc
ccagcagcaggatcattttccaagaactccccaccagtttctccagtggatccagttctc
ctctcccctgggcacaccaacgtaaaaagcaaatgtgccaagatctcatttttatccaaa
cctgtgcctctgtgccatgagcagtcattggaagataaaacaaatatcagcgtggttgaa
gtagaggacagcgaaaaggaagtaagtctgcattctgtgagcagtagtgtcttgctttgt
gatgagcccccaatcccctttgatgactgctggcatgttgagtatctgtcaccagtcaga
ggtcacagccaggactccaaccaggtcagccgtgcaaagaccagcactaccagcagcccc
aaaccaggctcttggcatgagcagtgggagagcccagtccacgcagaggagattaagggc
agtacccctcttccaggaagtcctgtcagcagaagaacaactttgctgtgtcttgaaaag
agtcctattgaggcatgttcgtcagtgggcaatagaccaagttacctgaactccaaaatc
tgggatgattggaatggagaggaggaggaagatgaatttccagagatgcttcctctgtct
cagaggttatcagctgcagcaggtgcccatcagacacatcctgtaaagactcctgaacct
tcctgtcaggagaacgacaagcctcccagcactccgatgacaccaatgccagcttactcc
atcatggagaccccacagctgaagaaggagttgagcagatttggagttcgtgctctccca
aaacgccagatggtgttgaagctgaaggagatattccagtatactcaccaggacgtggac
tctgactttgaggatgaaatcccatcttcccagcctcccctgcggaagtccccggccaaa
cgttctaggcagtcaaaggcaaaacagactgcaggtggaaagcgtgccaatgcctcgagg
gctgtgggcaaaaggaagcaggttgctacggcttcttcagtgctccctgtggggagggct
gatgatgaccttgttggaccccgagaaacaggctgtgcagcacccaaggagggaactaaa
gtgacacatcacccagaaggagccaaagagcagaaaagatcatctgtatctccagagaga
tggtctctggcagctgatggtgaggaaccgatcctctcagcatctcaggagtctgcagtt
tcttcagtggatggaagcgacatctcttttggttcacagagttctttcgtgaatggattt
gaagcctgtgattttgcatccgaggaagaggaagaggagcttccagcatctcaggcagca
gctcgggaagaagataagctggaggcagtaaggtgctacatccgttcaaacacagccctg
tacaacaagattctcttttatgagccaattgagctggctgcgttgcatgcagagctgaaa
cagaatggcattaaaatttccaaggcaaagctgctggactttttagacgctcattgtata
acatttaccacggctggagcccggaaggagaaggaacagaaaagaaaggggaacaaaaaa
cagaggaaacggtactga
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