Balearica regulorum gibbericeps (East African grey crowned-crane): 104632074
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Entry
104632074 CDS
T09009
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104632074 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breg03021
]
104632074 (PCF11)
03019 Messenger RNA biogenesis [BR:
breg03019
]
104632074 (PCF11)
Transcription machinery [BR:
breg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104632074 (PCF11)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104632074 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
CID
SHOCT
Motif
Other DBs
NCBI-GeneID:
104632074
NCBI-ProteinID:
XP_010296133
LinkDB
All DBs
Position
Unknown
AA seq
1636 aa
AA seq
DB search
MYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDDIFPLKKLYA
LDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESTAPTSAVTSGASTPPVVPEI
QKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQTKAQLAVSLSVQQGSSTIASVPAPS
KQHLSPTPLMTVKPPHQTAVQSEKNKPSPSSPLHDVKIVNRDPRLNRMAQHSSHAKDQSH
RKEFPPNTTSQSDTKANKTTQAEKQNSTKQEKLKASEKTQKKELDQSEAKSKSPSPLKNK
LPNTKDTKTQECESTKVSEISKRDPRLKRHLQDKSEGKEEEVKEKRRSTEKKEKEEHKTC
EHRPVGSRNKVINGAVQKQDTTTEESEKQSGKQGRSSSRKRSRSRSPKARSPSTHSPKRR
ERRSPKRRLRSLSPTSSAPKIAKIRQIGPKQSHVEEGTQAARDERNSNKRNVKQEVRDPR
RVKKAQEDRPQETASQHSTKASPDPKENAENWQGSKSGKRWKSGWEENKNSQQNEEHQAL
GKSPHQRHRENWPAGKGILSPRAPKQQHRLSVDANLQIPKELTSASKRELLKKANERLTS
GEITQDEFLMVAHQIRQLFQYQEGKHRCNVWDSPTEEKCGLKKKPLLSDAELTYYEHKAK
LKRTQVQHSLSRLDLLDPDDILDYHLPDALLSGIECEQAKAKRGVQFDRKEPFGERSRRH
SPVSGTNRPFADNLSPLESRRRLEEQNATKGARGSKNFDPYDSWGESDEFRDALRQQGKS
TTEFQKIDGDAICRFDNREERQLLGQAGVREEPRSPFSDRFKRARYEDPEKAPFPESPGS
RFGGIEAKQRISALMEDRPLFDGSPRQATARVGVDGQGSPFVDGPAAGSSSRIDGPAGQA
AMRFEGPLVAAGASQFDGPLAGAGGAGALRFDGPPGQLAGALRFEGPPGQVGGGGPLRFE
GPLGQIGGPLRFEGPAGQPVGGPRFEGPGVGLRFEGPRGQPSGGLRFEGPHGQPMGPRGQ
PGGGLRFEGPHGQPLGPHGQPGGGLRFEGPHLQPLGPHGQPGGGLRFEGPHGQPMGPHGP
SGGGLRFEGPHGPSGGGLRLEGPHGQPGVGPRLIDGPVHQGAGGLRFDGPLGRAGPRFDG
CHAAGFDGQPGQLSLLQRFDGIHGQPGPRFERAPGQQAQPRFDTAIPQRFDGPHQPASRF
DLPLGLQGARFENVANHPASRLEMSYGQGGPFVDHPGQGYNGPSHGMQFQRPDLFDGSPG
PNFNGPGGPGAQNFPLRGAGHYFDEKSLQGPQYGNFNNMPMGSNQVSLMSAQPGPYGQGQ
QYLPNPGSFVQNPAGALPHSYPDNHLGQLDVNELFAKLLSTGILKLSKTDSTSAQVNETS
SQPVAEEEDDDQNEDQNVPDLTNFTVEELRQRYDSVINRLYTGIQCYSCGMRFTTSQTDV
YADHLDWHYRQNRTEKDVSRKITHRRWYYSLTDWIEFEEIADLEERAKSQFFEKAHEEVV
LKTQEAAKEKEFQSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDEKIYHPS
CYEDYQNTSSFDCTPSPSKTPVENPLNMMLNIVKQETQESCDSPKVKEEPDDTPAACAEE
STPASTDVKTEPDESV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatggattccattgtcaagaatgtgggaagagaatatcttactgcatttact
aaaaacctagttgcaacatttatttgtgtatttgaaaaggtggatgaaaatactaggaaa
agtttatttaaattacgctccacatgggatgatatttttcctttgaagaaactatatgca
cttgatgtcagagtcaactcattagatcctgcttggccaattaaacctctgcccccaaat
gtgaatacttctagcatccatgtgaatcctaaatttttaaataaatcgccagaggaatct
actgcacctacctctgctgtcacttctggtgcctctactcctccagttgttcctgaaata
caaaagaatttgacacaggagcaactgataaggcagcagttgcttgcaaagcaaaagcag
ttgttagaacttcagcaaaaaaaattagagctggagctggaacagactaaagcacagttg
gctgtatctcttagtgttcagcaaggatcatctactatagcttcagttccagcgccttcc
aagcaacatctgtctcccacacctctcatgacagttaaaccacctcatcagacagctgtg
caatctgaaaaaaacaaaccatccccaagttctccacttcatgatgtcaaaatagtaaat
agggatcctcgactgaataggatggctcaacattcttctcatgctaaagatcaatctcat
aggaaagaatttccaccaaacacaaccagtcagtctgataccaaggcaaacaaaacaaca
caggctgaaaaacaaaactcaacaaagcaagagaaattgaaagcaagtgaaaaaacacag
aagaaagaacttgaccagtcagaagcaaaatctaaatcaccatcccctttaaaaaataag
ctacccaatactaaagatactaaaacccaggaatgtgaaagcacaaaagtatctgaaatt
agtaagcgggatccaagactgaaaagacatcttcaagataagtcagagggcaaagaggag
gaggtgaaagaaaagaggagaagtacagagaaaaaagaaaaagaggaacataagacgtgt
gaacacagaccagtaggcagcagaaataaagtaattaatggtgctgttcagaagcaagac
acgactacagaggagtctgaaaaacagagtggaaaacaggggagatcaagtagtagaaaa
cggtcacgatcacgctctcctaaggcacggtcaccatctacacattctccaaaaagacga
gagaggagatcacccaaaagaagacttaggagtttatctcccacttcatcagctcctaaa
attgcaaagatacgtcagatcggccctaagcagtctcatgttgaggaaggcacgcaagca
gcaagagatgaaagaaattccaataagagaaatgttaaacaagaggtgcgagatccaagg
agggtgaaaaaagcccaagaagacaggccccaagaaacagcaagccagcattctacaaaa
gcttctcctgatccaaaggagaatgcagaaaactggcaaggatccaaatcaggcaagagg
tggaaatctggttgggaagaaaataaaaactcacagcagaatgaagaacaccaagcactt
ggtaaatcccctcaccaaagacaccgggaaaactggcctgctggtaagggaattttatca
ccccgagcaccaaagcagcagcaccggttaagtgtggatgctaatttacagattcccaaa
gaattgacatctgcaagcaagagagaattacttaagaaggctaatgaacgcttaacatcc
ggtgaaataacacaagatgagttcctcatggtagctcatcagatccgacagctattccag
tatcaggaaggaaaacacagatgtaatgtctgggatagccctacagaggaaaaatgtggt
ttgaaaaagaaacctcttctatcagatgcagaattaacatattatgaacataaggctaaa
ctaaaaagaacacaagttcagcattcattgtcgaggcttgatctgttggatcctgatgat
attttggattatcatttgcctgatgcattgctttctggtatagaatgcgaacaagcaaaa
gccaagcgtggagtacagtttgacagaaaagaaccatttggagaaagatcaaggagacac
tctcctgtaagtggcactaatagaccttttgccgataacctttcaccgcttgagagtcga
cgaagacttgaggaacaaaatgctactaagggagcaagaggttctaagaacttcgatcct
tatgacagctggggagaatcggatgagtttagagatgctctcagacaacaggggaagagc
acaacagagttccaaaagatagatggtgatgcaatctgcagatttgataatcgtgaagag
agacagcttcttgggcaagctggtgttcgagaggaaccaagatcaccgttcagcgaccgt
ttcaaaagagctaggtatgaagatccagagaaagcaccgtttccagaaagtccaggatca
agatttggaggcattgaagcaaagcagaggataagtgcactaatggaagacagacctctg
tttgacggctcaccgagacaggccactgcaagggttggggtagatggacaaggaagtcct
tttgttgatggtcctgctgctggttcaagttccagaattgatgggccagctggacaggcc
gccatgagatttgaggggcctttggtggcggcaggtgcatctcagtttgatggaccactg
gcaggagcagggggagctggagccctaagatttgatgggccaccagggcagctggcaggg
gctttgaggtttgaaggacccccaggacaggttggtggaggaggtccactgaggtttgag
ggacctcttgggcagataggagggcctttgcggtttgaggggcctgcaggacagcctgta
ggtggtcccagatttgaaggacctggagttggtctcaggtttgagggtccccgtggccag
ccttcaggtggtctcaggtttgagggacctcatggtcaacctatggggcctcgaggtcaa
ccagggggtggtctcaggtttgagggaccccatggtcagcccttggggcctcatggtcaa
ccagggggtggcctcaggtttgaggggccacatttacagccattgggaccccatggacaa
cctggaggtggcctccgatttgaggggccacatggtcagcctatggggccacatggacca
tcaggtggtgggctcagatttgaggggccacacggaccatcaggtggtgggctcagattg
gaaggaccgcatggtcagccaggtgtcggtcctaggttgattgatggaccagtacaccag
ggagctggtggacttagatttgatggtcctctgggtagggccggtccgagatttgatggt
tgccatgcagctggatttgatggtcagcctggacagctgtctctcttgcaaagatttgat
ggaattcatggacagcctggtccaagatttgaaagggcgcctggccaacaggcacaacca
cgatttgatacagccatacctcaaagatttgatggacctcaccagccagcctctagattt
gacttgccccttggccttcaaggtgcgcgttttgaaaatgtagctaaccatcctgcctca
agactagaaatgtcttatggacaaggtggtccatttgtcgaccatcccggccagggctac
aatggaccatctcatgggatgcagttccagaggcctgatctatttgatggttcgcctgga
ccaaatttcaatgggccaggtggcccaggagcacagaatttcccattgagaggagctgga
cattactttgatgaaaaaagtcttcagggtcctcaatatggaaacttcaataatatgcca
atgggaagtaatcaggtttctctcatgtctgctcaaccagggccttatggccaaggtcaa
cagtatttgccaaatcctggaagttttgttcagaatcctgcaggagcccttccacattca
tatcctgataaccaccttgggcagcttgatgtcaatgaattgtttgctaaactgctgtca
acagggatcctcaaactgtcaaaaactgattccacttcagcacaagtgaatgaaacatca
tcccagccagttgctgaagaggaagacgatgaccagaatgaagatcaaaatgtcccagac
ctcactaacttcacagttgaagaacttagacagcgttatgatagtgtaataaatcgactg
tacactggaattcagtgttactcatgtggaatgagattcactacttcacagacagatgtg
tatgcggatcatttagattggcattatcgtcagaaccggacagaaaaagatgttagcaga
aaaattacacacagaagatggtactacagtttaacagattggattgaatttgaagaaata
gccgatctagaggagcgtgcaaagagccagttttttgaaaaagctcacgaagaagttgtg
ttgaagacacaagaagctgcgaaagagaaggagtttcaaagtgtccctgcgggaccagct
ggagcagttgagagctgtgaaatctgccaagagcaatttgaacagtattgggatgaggaa
gaggaagagtggcatctgaagaatgctatcagagtagatgaaaagatttaccatccatct
tgctatgaagattaccagaatacatcatcatttgattgcaccccatctcccagcaaaact
cctgtagaaaatccactaaatatgatgttgaacattgttaaacaagaaacacaagagtcc
tgtgactcgcctaaagtcaaagaagaacctgatgacacccctgctgcctgtgcagaagag
agcacacctgcatctacagatgttaaaacagaacctgatgagtctgtttaa
DBGET
integrated database retrieval system
