KEGG   Balearica regulorum gibbericeps (East African grey crowned-crane): 104632090
Entry
104632090         CDS       T09009                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
breg  Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04382  Cornified envelope formation
breg04510  Focal adhesion
breg04512  ECM-receptor interaction
breg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:breg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104632090 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104632090 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104632090 (COL4A6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104632090 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:breg04147]
    104632090 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:breg00536]
    104632090 (COL4A6)
Exosome [BR:breg04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104632090 (COL4A6)
Glycosaminoglycan binding proteins [BR:breg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104632090 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104632090
NCBI-ProteinID: XP_010296151
LinkDB
Position
Unknown
AA seq 1693 aa
MAEAQALIIDCDPSRIVYRGGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIG
APGFTGPEGLPGAKGERGAVGPPGRAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPG
LDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKGEYGLPGLDGI
SGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPP
PSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGVPGFGGVGEKGEKGVPGLPGGRGLL
GLDGSDGIPGRKGHAGIPGYPGLDGVEGAKGELGDIGPPGPPIVIDKEGVVISGAPGDPG
NPGIPGPPGDEGISGLPGFPGAPGFPALERDGMGPGGSPGIPGVKGEVGEPGRATIGLPG
TPGRDGLPGLPGAPGLPGSPRPSFPSDTILDGRPGAPGEPGQRGLPGALGPKGYKGEAGD
CACDGGVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGLRGPPASDGQQGLPGL
KGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEK
GLPGLRGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPG
AYGPPGTPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGKIGLQGEPGFPGPRGEQG
SQGLPGLDGTDGLPGKMGASGLAGMKGAPGDVFGAESGALGERGRPGLPGDKGLTGDLGF
PGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSVGLVGAPGC
QGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGQDGHPGFSGPKGE
KGSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGGKGSPGVVGLQGQKGDRGDVGPPGLPVV
GPPEQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPVGSASKERGLHGDPG
FPGPPGQPGLPGQKGAHGIVGFQGMPGERGSDGITGTLGFPGSIGLPGPKGDQGESVGVA
GIAGAKGERGDRGFPGERGREGLKGEPGYPGNTGVSGLKGGPGDLGQEGPAGIPGNAGPR
GIPGPPGPPGQQGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKG
PAGLPGPKGEEGSPGLGRGPLGFPGPKGSSGDMGSPGPVGLPGLPGTPGVSLPSDIRGRP
GDAGHPGTDGSSGLSGPPGPRGPPGPASDQGDTGNPGFPGVPGLQGIKGDMGPTGPVGLP
GASGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRQGAPGITPQPEEVTAP
AGLPGLPGIDGVPGFDGDPGFQGPAGKPGAKGLPGRSGLKGRDGLPGSPGIVGDPGPLGA
PGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYV
EGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDS
VQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSL
VSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLR
TRVSRCQVCMKNL
NT seq 5082 nt   +upstreamnt  +downstreamnt
atggctgaggcacaagctctaattattgattgtgatcctagtcgaatagtctacaggggt
ggaaagaagtcttacagtgggccatgtgggggccgcgattgcagcgctggatgcaaatgt
tttccagagaaaggtgcacggggtcgaccaggaccgattgggcttcaaggaccgataggt
gcacctggatttactggcccagaaggtttgccaggagcaaaaggtgagagaggagcagtg
ggcccccctggacgagctggacagaaaggtgacaagggcccaatgggagttccaggattt
caaggcatcaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcctggc
ctcgatggctgcaatggtaccactgggagtcctggtgtttctggatcagatgggtttcct
ggactgcctgggctgcctggtcgccctggcccaaaaggccttaaaggagaacctgttttt
gctcaaggcagtcttaaaggaatgaagggagaatatggtcttcctggattggatggaatt
tctggcccaaaaggttttccaggtccaataggttctgcaggccctataggattgccaggt
ttgcagggtccaatgggtccccctgggccaccaggtccaaaaggtaacatgggattaggt
tttcaaggagagaaaggagaaaagggcgatgtagggttgcctggccctccaggtccccca
ccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaagggt
gagccaggccctcaaggattccctggagacaaaggattgcctggcgtgccgggctttgga
ggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtcttttg
ggactggatggatctgatgggattccagggagaaagggtcacgcaggtattccaggctat
ccaggactggatggagttgaaggcgcgaagggtgaattaggtgacatcggtcccccaggc
cctcctatcgttattgacaaggaaggtgtagtcatttcaggtgccccaggtgaccctgga
aacccaggaatacctggtcctccaggagatgaagggatcagtggtttaccaggctttcca
ggagctccagggtttccagccctggagagagatggaatgggccctggaggatctccaggt
attccaggcgtgaagggtgaagtgggagaaccaggaagagcaacaattggattaccaggc
actcccggcagagatggtttaccgggtctgccaggagcaccgggtttgcctggttcacca
cgcccttcattcccctcagacacgatcctggatggaaggcctggggccccaggggagcct
ggacaaagagggctgccgggagctttgggtccaaaagggtataaaggagaggcaggtgat
tgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccaccaggt
ccatcaggaagccctggtgtgcctgggattaagggcattggtggagacccaggcactgtg
ggcgcaccaggactgcgaggtcctccggcttcagatggtcagcaaggtcttccaggcctt
aagggagaaaaaggggattcatcctacgcaacaggcaggggtgctcgtggggaccgtgga
gcgacagcacccagaggaccttcgggcatcccaggaacccctggcagggatggacttcca
ggtttgccaggcccaccaggccctccaggtgatggtgggctgggtttcccaggtgaaaaa
ggactgccaggattacgtggctccaagggccatcgtggagaaactggttctcctggtgtt
ggatatccaggtcctagtggagttcgtgggccaccaggtgacccgggaatggatgggttt
ccaggacaagcaggtcttccaggccccccaggtatcaccttgccctgcatagttcctgga
gcgtatgggcccccagggactcccggctttccaggattgccaggtcccaaaggcagcaaa
ggctttcctggcattccaggccaacctggattacatgggtcaaaaggacagccagggtct
ccaggaaaaataggattgcaaggggaacctggcttccctgggcctcgaggagagcaaggg
tcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgcttca
ggcttagctggaatgaaaggagctcctggggatgtatttggtgctgagagtggagccctg
ggagagcgtggccgacctggactcccaggtgataaagggctcacaggtgatcttggattt
ccaggaccaaaagggttagacggaagaccaggcctcctaggtattaaaggcgaacagggc
aatccaggctattcaggtgtccctggattacggggacctcctggtcctggaggccctttt
ggcattaagggaaaaccaggacccttgggatcagttggccttgtaggagcaccaggctgt
caaggacttcctggagtcaaaggcttgactggggatgtaggtccacaaggccctgctggt
atgaaaggcttcccaggtctggatggtgctccaggatctcctggggaaagaggattctta
gggccacctgggccttttggtcaagatggacatccaggtttctctgggccaaaaggcgag
aaagggtcttctggcctgcttggtttccctggcatgccaggcctgcctggtgtccctggg
gtgaatgggtttaaaggaactcctggcacagctggaggaaaagggagccctggagttgtg
ggactccaaggtcaaaaaggtgacagaggtgatgtaggtccacctggtcttcctgttgtt
gggcctccagaacaggcactgcaattcaaaggagacaaaggagatcctggattagctgga
cttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacagcct
ggtctccctggtccggttggatcagcaagcaaagagagaggtcttcatggtgacccaggc
ttccctggtccacctggacagcctgggctgccaggacagaagggtgcacatggtattgta
ggatttcaaggaatgccaggagagaggggttcagatggtatcacaggaacacttggattc
ccaggatctatcggcctccctggtccaaagggtgaccagggagagtctgttggcgttgct
ggcattgctggagcaaaaggagagcgaggggaccgagggttcccaggagagagaggcaga
gaaggactcaagggtgaaccgggctacccaggaaacactggggtgagtggactcaaaggc
ggcccaggagatcttggccaagaaggaccagcaggaatccctggaaatgctgggccgaga
ggaatccctgggccaccaggacctccaggccagcaaggatctgtcggattccctggagct
cgtggaacagcaggacctaaagggtttcatggatttccaggtttaaatggtctgaatggc
ttgccaggcacaaaaggatctcctggaacaccaggtctgagtgaagctggactgaaaggc
cctgcaggtctcccaggtccaaagggtgaagaaggctctccaggcttgggtagaggacct
ctaggattccctggaccaaaaggctcatcaggagacatgggttcccctggtcctgtggga
ctgcctggcttgccaggaacacccggagtttctcttccttctgatatacgtgggagacct
ggggatgctggccatccaggaactgatgggagttcaggcctttcaggtcctccaggacca
cgagggccccctggtccagcttctgaccaaggtgacacaggcaatccaggtttccctggt
gttcctggcttgcaaggcattaagggtgacatgggacccactggtccagttggactccct
ggagcatctggattcaaaggtgtaagaggtgagcctggccttatggggatgccgggtaaa
gatgggcctccgggggatcccggttaccctgggctgaaaggtgaaatgggccgtcgaggt
ctccctggccgacaaggggctccaggtataaccccacagccagaagaagtcacagcccct
gcgggcttacctggtctgccaggaattgatggtgtccctggctttgatggagatccggga
ttccagggcccagctggaaaaccaggcgcaaaaggtctgccaggaagatctggtttgaaa
ggacgtgatggcttacctgggtcacctggcatagttggggatccaggacctttgggtgcc
ccaggaccacagggatttgaaggtgttgctggaaagccgggttcacttggtttgccggga
atgcctggtcggagcgtgggcgttgggtacacgttagtgaaacacagtcagtcagaccaa
atcccgccttgtcccataggaatgaataagctttgggacggctacagcttattgtacgtg
gaggggcaggagaagtcacacaaccaggatctcggttttgctggctcgtgtttgcctcgc
ttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactatgccagccga
aacgataagtcctactggctctccaccactgctcctatccccatgatgccagtggacagt
gttcagatcccgcagtacatcagccgctgctcggtatgcgaagcaccttcccaggctgtg
gccgtgcacagccaggatatcaccatcccacagtgtccccttgggtggcgcagcctatgg
ataggatattccttccttatgcatactgcggctggtgcagaaggtggaggtcagtccctt
gtctcacctgggtcttgcctggaggatttccgtgctactccgttcattgaatgcaacggt
gctcggggaacatgccattactttgcaaacaaatacagcttctggctgacgaccgttgaa
cagtcgcagcagtttgtcagtgctcctccctcagaaaccctgaaagcaggacagcttcga
acaagggtcagccgttgccaagtgtgcatgaagaacttgtag

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