Balearica regulorum gibbericeps (East African grey crowned-crane): 104632100
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Entry
104632100 CDS
T09009
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04140
Autophagy - animal
breg04142
Lysosome biogenesis
breg04145
Phagocytosis
breg04148
Efferocytosis
breg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104632100 (VPS39)
04142 Lysosome biogenesis
104632100 (VPS39)
04140 Autophagy - animal
104632100 (VPS39)
04148 Efferocytosis
104632100 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104632100 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
breg04131
]
104632100 (VPS39)
Membrane trafficking [BR:
breg04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104632100 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
LIF1_N
Lgl_C
DUF4145
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
104632100
NCBI-ProteinID:
XP_010296164
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MIRLDKAFPTASAVSIREEWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQ
QIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCV
AVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKE
LFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAMEHQPPYII
AVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQL
LQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTH
VMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQS
STSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKK
AHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYS
VWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADF
HNCLIQLYCEKVQGLMKEYLNSFXEDKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSR
LISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNRDGNKDVY
LSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQIS
EIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKK
IGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgataagacttgataaagcttttccgactgcttcagcagtttccatcagagaggaatgg
ctccttgttggtaccaaacaagggcatcttcttctttacaggatcaagaaagacataggt
tgcaataggtttgaagtgacactagagaaatccaacaagaacttctcaaaaaagattcag
cagattcatgttgtttctcagtttaaaattctggtcagtctattagaaaataacatttat
gtccatgacctgttgacatttcaacaaatcactacagtttccaaggcaaaaggtgcatct
ctcttcacttgtgatcttcagcagtcagatacaggggaagaggtgctgagaatgtgcgtg
gctgtgcggaagaagctccaactttatttttggaaggacagagagttccatgaactacag
ggagactttagtgtacctgatgtacccaagtctatggcctggtgtgaaaactccatctgt
gtaggcttcaagagggactattaccttatacgggtggatggaaaaggatctatcaaagaa
ctgtttcccacagggaagcagctggaaccattagtagctcctgtagcagatggaaaagtt
gcggttggccaagatgatctaacagttgtgctcaatgaagaaggaatctgtactcagaaa
tgtgccttgaattggacagatattcctatagccatggaacaccagcctccctacatcatt
gctgttctgccacggtatgtagagatccgcacttttgaaccccggctactggtacagagt
attgagctgcagaggccacgcttcatcacttctggaggcacaaatattatatatgtggca
agtaatcattttgtttggcggctcattccggtgtccatagccacacagatccagcagctt
ctgcaggacaagcagtttgagttggctttgcagttggcagaaatgaaagatgattcagat
agtgagaagcgacaacaaattcatcacataaagaacctctatgccttcaacctcttctgc
cagaagcgctttgatgaatccatgcaagtttttgccaagcttggtacagatcccactcat
gtgatgggtctgtatcctgacctcctgcccacagattacaggaaacagctgcagtatccc
aaccccctgccagggctctctggggcagagctggagaaggcacatttagctctgatagac
tacctaactcaaaaaagaagtcagctggtgaagaagctaaatgattctgaccatcaatcc
agtacctcacccctcatggaaggaacacccacgatcaaatccaaaaagaagctgctacaa
atcattgataccaccctgttgaagtgttacctccatacaaacgtagcactggtggcacca
ttgctacgtctggagaacaatcactgccatatcgaggagagtgagcatgtactaaagaag
gcacacaaatacagtgagctgataatactgtatgagaagaaaggtctgcatgagaaagca
ttacaggtactggtggatcagtcaaagaaagccaactcacctttgaagggtcatgagaga
acagtgcagtatctgcagcatttgggcacagagaacttgcacttggtattttcctactct
gtctgggtgctaagagattttcctgaagatggactgaagatatttacagaagatctccct
gaagtggaagctttgccacgagataaagtgctcagtttcttgatagaaaactttaaaagc
ttgactattccttatctggaacacatcattcatgtctgggaagaaactggtgcagacttt
cacaactgtctgatccagctgtactgtgagaaagtgcagggcttaatgaaagaatatctc
aactctttccntgaagataaaactccagtccctgctggggaggaaggaggagacttgggg
gattaccggaaaaagcttctactttttctggagaagtctagctggtatgaacctagtcga
ctaattagtgacttcccctttgatggtctcctagaagaacgcgctctgctcttgggtcgt
atgggaaagcatgagcaagccttgtttatttatgttcatattttgaaggacaccaacatg
gctgaaaactactgccataaacattatgacagaaacagagacggcaacaaagatgtctat
ctgtcactgctccggatgtatctctccccacctagtgttcattgcctgggaccaatcaag
atggaagtgctggagcctcaagccaatctgcaggctgctctgcaggttttggaactacat
cacagcaaactggataccaccaaggcgataaacctactcccagcaaatacacagattagt
gagattcgaatcttcttagagaaagtccttgaagaaaacgctcagaagaaaagatttaat
caagtactcaagaatcttctccatgcagagtttctgagggtccaggaggagcggatcttg
catcagcaagtgaagtgcattattacagaggagaaggtgtgcactgtatgtaaaaagaag
ataggtaacagtgcatttgctcgataccctaatgcaatagttgtgcattacttctgctcc
aaagaagtcaacacgttggacacctga
DBGET
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