Balearica regulorum gibbericeps (East African grey crowned-crane): 104632597
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Entry
104632597 CDS
T09009
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04510
Focal adhesion
breg04512
ECM-receptor interaction
breg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104632597 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104632597 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104632597 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
breg04147
]
104632597 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
breg00536
]
104632597 (COL4A1)
Exosome [BR:
breg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104632597 (COL4A1)
Glycosaminoglycan binding proteins [BR:
breg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104632597 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104632597
NCBI-ProteinID:
XP_010296804
LinkDB
All DBs
Position
Unknown
AA seq
1633 aa
AA seq
DB search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NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagaaagaggcttgcctggactacagggtgtgattgggtttcctggaatgcaa
ggacctgaaggtcctcctgggccaccagggcttaagggtgatactggagaaccaggactg
ccaggaacaaagggaacgagaggccccccaggagcatcaggctttccaggaaacccaggc
cttcctggcattcctggacaagatggccctcctggtccacctggcattccaggatgtaat
ggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggactgactgggagc
ataggacccccaggacctcctggaatgaagggagatccaggtgaagtgattggtctttta
cctcctagtgtgctaaaaggtgataaaggctttcctggccaacctggactacctggtcca
cctggaactccagggtttcagggaccaatggggccacaagggcctccaggagatccaggt
cccccagggccaccaggactcccaggtgagaagggctacatgggcttgggctttcagggt
cctaaaggtgaaaagggagaacaaggggtaaggggacccccaggtcccccgggaccatca
ccacatatgaaagaaaaagggagtgaaatcataagaggagaaaagggtgatccaggtgaa
aagggtgaacagggagccccaggattgccaggttcaggtttcaaaggagaaaagggtgaa
cctgggaagcctggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaagga
gaacccggtttgcctggtgggtttgggattccaggacaacccggggagcctggtgtgaag
ggtcagaaaggtgaacaaggttttccaggacctccaggaagaattatagatactggacca
gtagatacctttggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggt
caaaaaggtgaaaaaggtttccctggtatacaaggaatcccaggacctccaggtcgacca
cttccagacagggttggatcacctggtgtccctggagagagaggcgaaaaaggtgaaaag
ggttctccgggattctctatgcccggaccccctggaagagatggtttcccaggtcccccg
gggttgcctggcccaccaggtcctccaggcaaaacagatggaattgatcaatgccagcag
ggagaacctggtgcaccaggtagtcctggagctccaggaagagatggatttccaggagag
atgggagagaaaggtgacaaaggtgaatcctgtgccttatgtgataaagtaggacctcct
ggacttccaggaccacaagggccaccaggtccagcaggttttccaggacaatcaggtttc
aagggtgacagaggcttacctggactagatggccttccaggggtacctggccccccaggc
actccaggacttatgggcagccctggggcaaaaggagaaccgggagatttttcttatgat
tctatcctgaaaggtgaaaagggagatcctggtttcccaggacaaccaggtattcccgga
agagaaggaagaccaggaaaagacggattgccaggtctccagggtccgaaaggagcatcg
ggtacagctggcttgaaaggagaacgtggtccccctggtcaacctggattccctggagta
cgtggtgaaagaggttttcctggccctcctggaataggcactgcagggttacctggtgac
aaaggagacagaggctttgctggaaccccaggtttaccaggccttccaggagcaaagggt
gaagcaggacgaactgtgccgctcccaggacctcctggggcggatggccttcctgggccc
cctggtttccctggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggc
ctgccaggagaaaaaggtgctgttgggcagccaggtatagggttccctggacctccagga
cccaaaggtttcccaggtcagcctggctcgcctggtctgccggggactccaggaacccct
ggcctggatggtttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgta
ggtctccctggccctaagggactgccaggccccccaggcccagctggcagccctggagaa
aagggaaatccaggactgcctggcttacgaggcgagcaaggctttccaggcatacctgga
cagcaaggattcagaggtgaccctggcctcccaggactgcaaggcttgcagggtcctccg
ggtgcgccagggctgggtccacaggggtcaccgggacctgccgggcagccaggaccccag
ggaccgccaggatttcctggaataaaaggagaaaggggcttccctggtatcccaggtcta
gatatgccaggaccaaaaggggataaaggtagccagggccagcctggagtaccagggtct
gtggggttacccggcctgccaggtccacagggggccattggactgaaaggatcagcagga
gccaaaggagaaatgggagttatgggaactcctgggttgccaggagttcctggaccagtt
ggagatcgagggttgcctggtgaaaaaggtagccaaggtttcaaaggtatagttggacca
cagggtgatcctggtgtaaaaggagataaaggtgaagctggtctcccaggaaaacctgga
acaatggacaacatggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaa
ggggaccatggagcaacaggagaaaaagggttacgtggggaatatggagaaccaggaatt
ccagggaaggatggtgaacctggtacgccaggacatccaggaccaaaaggtgatcagggt
cccccagggtatccaggggatccaggaattccaggacaaaaaggatcagttggtgaaatg
ggtttgccaggaacaccgggagaaaagggtctgccaggagtaccaggctcaccaggcaca
ccagggttccctgggcaaaaaggtgaaaaaggagacaaaggacaaccaggttttcctgga
attggctttccagggtctcctggcgagaagggagaaccaggaagaacaggtagtccaggt
ttatctggagataagggtgaaaagggtagtgcaggaattcctggaatgccgggtgcccca
ggtcccaaaggatcccctggcatggcaggatttccaggcaaccctggccgccatggagag
aagggtgaaaaaggacttccaggcttaagtggcattccaggtttaaaaggagaaccaggt
gaacctggcgttccgggtcctgctggttccattggacagaagggtgaaccaggttatgat
gggattccaggtgcagctggtgcaaagggtgaacaaggtattccaggtagaggacttcca
ggatttcccggtgcaaagggagataaaggtgcgaaaggtgatgtgggttttccaggatcc
ccaggaagtccggggatcccaggcctgaaaggagaaccaggatatgctggtccacccggc
ccaaagggcagccaaggtctccctggactaccaggaagtgcaattgagggccctaaagga
gacagaggaccccaaggccaacctggccttccaggtttaccaggtccaacagggccacca
ggacccccaggtctgaaaggggccaagggagagcagggaagcaatggctggcctgggact
cctggaggtccgggagtcaaaggtgatccgggtttccagggcctgccaggtagtcctggt
ttaccaggagatattggtcaaaagggtgatctgggacctccaggagttccaggcgttcca
ggtccaaaaggatctcctggcttcccaggccttaagggtgaacgaggtgaccaaggtctt
ccgggatctaaaggtttacaaggcccaccaggcccgccaggtgcttttcagcttgttaaa
ggggatcctggtttacctggccctgtaggaccagttggtctcaaaggattcccgggactt
ccaggtcccaaaggacagcaaggggtgacaggaccttcaggtgtacctggaccacctggt
agtccagggtttgatggtaaacctgggcaaaaaggagaaattggtccttatggtccccca
gggcccagaggattccctggtccacctggccctgaaggtttgcctggagctatgggccca
ccgggtgcaccatctgttgctcatggcttccttgttaccagacacagtcaaaccactgaa
gaaccatcgtgtccatttggaacaaggctgatttaccatggctactccttgctttatgta
caaggcaatgaaagagcccacggccaagatctgggcacggcaggaagctgtcttcgtaaa
tttagtaccatgcctttcttattctgcaatatcaacaacgtatgtaactttgcatcaagg
aatgactattcctactggctgtccactcctgaacccatgccaatgagtatggctcctatc
actggtgataatatcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatg
gtaatagcagttcacagtcaaacaattcaaatcccaccatgtcctgaaggctggagttca
ctttggattggttactcctttgtcatgcacaccagtgctggtgcggaaggttctggccag
gccctggcatctcctggttcctgcctagaggagtttcgcagcgctcccttcattgaatgc
catggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgccactata
gagaggaatgagatgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgc
tcaaatgttagccgttgtcaagtctgtatgagaaaaacataa
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integrated database retrieval system
