Balearica regulorum gibbericeps (East African grey crowned-crane): 104632758
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Entry
104632758 CDS
T09009
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03008
Ribosome biogenesis in eukaryotes
breg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104632758 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
104632758 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breg03021
]
104632758 (XRN2)
03019 Messenger RNA biogenesis [BR:
breg03019
]
104632758 (XRN2)
03009 Ribosome biogenesis [BR:
breg03009
]
104632758 (XRN2)
03016 Transfer RNA biogenesis [BR:
breg03016
]
104632758 (XRN2)
Transcription machinery [BR:
breg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104632758 (XRN2)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
104632758 (XRN2)
Ribosome biogenesis [BR:
breg03009
]
Eukaryotic type
Pre-60S particles
RNases
104632758 (XRN2)
Transfer RNA biogenesis [BR:
breg03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
104632758 (XRN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF8363
Motif
Other DBs
NCBI-GeneID:
104632758
NCBI-ProteinID:
XP_010297035
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
AKECNGIKAPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI
DRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQEILAKGGI
LPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGE
HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCAL
CNQMGHEVKDCQGLPREKQGKHDQFADSLPFAEQEFIFIRLCVLREYLERELTMASLPFT
FDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVN
LQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKRKRMKRDQPSFIPGGQFSPQALGN
RSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSLTSDGSPSLAGGIKRKAEDSDSEPEP
EDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGCASWNWYYP
FHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESSI
IDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLGGDVLF
VGKHHPLCDFIVEQYKTKNTEPVDMPPELCHGIQGKLTLNENAVLPDQTVESPVPMLRDL
AQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPVLKPGDWEKTNNDGRPWRPQLGFNRD
RKPVHLDQSAFRTLGHTMPRARGMPGMYANAVPLGTYGSPYTRPLLSGQQQIPKLLSNLR
PQESWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQNQYQPSQYQGLGGPMSYPQRPEDRM
DRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gctaaggagtgcaatggcatcaaggctccaattgatacaagcaaaccaaaccctaatgag
gtggagtttgataacctgtatttggatatgaatggtataattcacccttgtacacatcca
gaggacaagccagcgcccaaaaatgaagatgaaatgatggttgcgatttttgagtatatt
gacaggatcttcaacattgtgagaccaaggcgacttctttacatggctatagacggagta
gctccacgtgcaaaaatgaatcaacagcggtcaagaagattcagagcatcaaaggagggc
atggaagctgctgaagagaagcaaaaaatcagacaagaaattctggcaaaaggtggcatt
cttcctccagaagaagtgaaagagagatttgacagcaactgtattaccccgggaactgag
ttcatggacaatcttgctaaatgtctccgctattacattgctgaccgtttgaacagcgac
ccagggtggaaaaatctgacagttatcttgtctgatgctagtgctcctggtgaaggtgaa
cataaaatcatggattacattagaagacaaagagctcaaccaaaccatgacccaaacacc
catcactgtctgtgtggggctgatgctgatctgattatgcttggtttagctacacatgaa
ccaaacttcactataattagggaagagtttaaaccaaataaacccaagccatgtgctctt
tgtaaccagatgggtcatgaggttaaggattgccaaggtttgcccagagaaaagcaaggc
aagcacgatcagtttgcggacagtcttccttttgctgaacaagaattcatcttcatccga
ttatgtgttctgcgggagtatttggaaagagagctcactatggccagtttgcctttcact
tttgattttgaaagaagtgttgatgactgggtctttatgtgcttctttgtgggaaatgac
tttcttcctcatctgccatctttggagatcagggagggagcaattgatcgcttggttaac
atatataaaaacgtggtgcacaaaactggggggtacctcacagaaagtggttttgtcaac
ctacagcgggtccagatgatcatgttagctgttggagaagttgaagacagtattttcaaa
aagagaaaagatgatgatgataactttaaaagacggcagaaagaaaaaagaaaaagaatg
aagagggatcagccttcttttattcctggtggccagttttcccctcaagctctgggaaat
cgatctagtcctcaggcaatcagtaaccctagacaagctgcctttgagatgagaatgcac
gacagacagaattctacaacttcatcatctccaaataccagcctgacttctgatggcagc
ccatccctggcaggaggaattaagcgaaaagctgaagatagtgacagtgaacctgagcca
gaggataatatcaggttatgggaaactggttggaaacagcgctactataaaaacaaattt
gatgttgatgcatctgatgagaaattccgtcgtaaagttgtacagtcctatgtggaaggg
ctctgctgggttctcagatactattaccagggctgtgcatcctggaactggtactaccct
tttcactatgctccgtttgcctcagactttgagggtattgcagacatgccttcagatttt
gagaaaggctcaaaaccgtttaagcctcttgaacaacttatgggagtatttccagctgca
agtggaaattttctgccaccaacgtggaggaagctcatgacagatccggaatcaagcata
attgacttctaccctgaagattttgctattgatttaaatgggaagaagtacgcttggcaa
ggtgttgcattattgccatttgtggatgagcgacgccttagagctgccctggaagaagtc
taccctgacctcactcctgaagaaagcagaagaaacagccttggtggggatgttctcttt
gttggaaaacaccatccgctttgtgactttattgtggaacagtacaagaccaaaaataca
gagccggtggatatgcccccagagctgtgccatggaatccagggaaagctgactctgaat
gaaaatgccgttcttccagatcagacagtggagtctcctgttccaatgctgcgtgatctt
gcacaaaactctgcagtcagtatctctttcaaagatccacaatttgatgaagactttgtt
ttcaaggctatagtgttacctggtgcaaagaaacctgctccagttctgaagccaggagac
tgggaaaaaaccaacaatgatggcaggccatggagaccacagctgggttttaaccgagac
agaaaaccagtccatttggaccagtcagcatttagaactttgggccatacgatgccgcgg
gcaagagggatgccaggaatgtatgccaacgcggtacctctgggaacttacgggagccca
tacaccaggccgcttctgagtgggcagcagcagattcctaaactgttgtcaaatcttaga
ccacaggaatcgtggcgaggtcctacgcccttgtttcagcagacgccgcagagaactgct
ggggctgctcctcttctcgcctggaatcgcatgctgcaatcccaaaatcagtaccagcca
agtcagtaccaggggctgggcggaccaatgagttacccgcagagacctgaagatcggatg
gacaggggaagacaggcatacggccccgggaggccctacccgctgccaccgccctcagga
agatacagctggaattag
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