Balearica regulorum gibbericeps (East African grey crowned-crane): 104633141
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Entry
104633141 CDS
T09009
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breg03021
]
104633141 (SCAF8)
03041 Spliceosome [BR:
breg03041
]
104633141 (SCAF8)
Transcription machinery [BR:
breg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104633141 (SCAF8)
Spliceosome [BR:
breg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104633141 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
104633141
NCBI-ProteinID:
XP_010297566
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGSXXXXXXX
XXXVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSP
QGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVS
FNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQ
LLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVEPNVDDSMDIQQQDMDIDEG
QDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRER
KRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFE
EFGQIESINVVAQLAVNGELKKRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWA
LNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAK
ESIQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGY
SAIPPPPFLRASFNPTQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQET
MKDVPFTSLVLPVGTVTSNLATPTLSAGSIFNPLPVNKPESDEKGSHLADLQISSSENSR
SVQSDVSSSSGLVGGVQPPSVSSSSGLPGEGQPPSVSSSSGLAGGVQPPSVSSSSGLIGG
VQPPTVSSSSGLAGGIQLPTVSSSSPLAGGVQPASVSSSSGLMTGVQPPNVSSSSGLLAG
VHPPSVSSSPGLLTGMQPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNVSSSSGLMGVP
PPNISSSSGLLAMQHPAGVQNMPHLNISSQRMPGMPLIDIRPGLVPHSPGPRFPLIQPVM
PPQRSIPPPAILDPSLHPPPRGPFPPADIFNQTERPFGTPGRQNIDSISNPEKRLPLGGD
NIQQEXNRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFARPHV
DMRENFGRPGIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKSFHEDRERFRH
VNYRFDSRSGPNWNRGFEQDSHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMS
NNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDPELYEKLTSSI
EINKEKSDTEADIESEPVVESTETEGT
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcatgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtacctggtctgtatgtc
attgactccattgtgagacagtcccggcatcagtttggacaagagaaggatgtatttgct
ccaagatttagcaataacatcatcagcactttccagaacttgtaccgttgtcctggggat
gataagagtaaaattgttagagtgctaaatttatggcagaagaataacgtgttcaagagt
gaaattattcagcctctattggatatggcaggaggatcnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnngtgacccctgtcttgcccagtactacagctgctatgagcaacaatacacca
ggaacacctgtgactccagttactccagccaatgtggtgcagagtttacctgatccttgg
gtatctcagattgctaatacagatacccttgctgctgttgcacagattttacaaagtcct
caaggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaacctcag
ccttcactacttcaagccctggatgctggtctagttgtgcagttacaggccctcacagca
caacttacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctct
tttaataagaagctgatggacaggtttgactttggggaagaatctgaacaaaatgaagag
cctaaaaaggaaactcccacatcccaactgcctttagtaccagagtctgtgaacaactca
ctttttcaccaactagctgaacagctacagcaacaaaatttagaacatctcagacaacag
cttctggagcaacagcagcctcaaaaggcaagccctgaagagaatcaagaaggaaatttt
ggttcagagcactctgcatcaccatcacaagggagcagtcaacagcagtttttagaagtg
gaaccaaatgtagatgattcaatggatattcaacaacaggatatggatatagatgaagga
caggatgttgctgaagaagagatttttgaacaagaagaaaagaaatcagctgttcgttca
agatcaagaactcgatcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatca
cggtctggttctcgtaagcgtaaacacagaaaacgttcacgctcaaggtcaagagaaagg
aagagaaagtcgtctcggtcgtattccagtgaaagaagggctagggaaagggaaaaagaa
cgtcagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactact
ctttgggtaggtcaagtagacaagaaggctacacagcaagatttaactaacttgtttgaa
gaatttggacaaatagagtcaattaatgttgttgctcagcttgcagtgaatggggagctt
aagaagagaggttgtgcttatgtctgtatggtacatagacaagatgcgtatcgtgctctt
cagaaacttagttctgggtcctataaaatcggatctaaaattattaagattgcctgggct
ttgaataaaggtgtgaaaacagaatacaagcagttctgggatgtggatctgggagtttca
tatattccttgggagaaagtaaaattggatgatttggagggctttgctgaaggtggcatg
attgaccaggaaacagtaaatacagaatgggaaacagcccgaagctcagaagctgctaaa
gaaagtattcaaactacgcagagcgctgcagttgataagagtacagttattacaacgcag
acagaagcttacacacaaccagtcactatgctgcagattccagtagctccagctgtgcct
gctgttagcttggttccacctgcgtttcctgtcacaatgtctgtccctcctcctggttat
agtgcaattcctcctccgcccttcttgcgggcaagtttcaaccctacacagccacctcca
ggttatatgcctcccccagttccacctgtagtcccaccacctgtggtcccaccacctgtt
gtcccaccagttgttccaacacctttagtacaacctccattaccaattgcacaagagacg
atgaaggatgttccttttactagccttgttctaccagttggcacagttactagcaatcta
gctactccaacgttatctgctggaagcatttttaatcctctgccagtcaacaaaccagaa
tcagatgagaagggatcacatcttgcagaccttcagatttcttccagtgaaaacagtaga
tctgtgcaaagtgatgtctcaagtagctctggacttgttggaggagtgcagccacctagc
gtctcaagcagttctgggcttcctggagaagggcaaccacccagtgtctcaagtagctct
ggacttgcagggggagtacagccacctagtgtttcaagcagctctggacttataggagga
gtgcaaccaccaactgtttcaagcagttctggtcttgcaggaggaatacagctacctact
gtctccagtagctctcctcttgctggcggagttcagccagccagcgtctcaagtagctct
ggacttatgactggagtgcaaccaccaaatgtctcaagtagctcagggcttctagctgga
gtgcatccacccagtgtctcaagcagccctggccttctgacaggaatgcagccacccaat
gtctcaagcagctcaggagttctggcaggagtacagccaccgagtgtctcaagcaactct
gggcttctcataatgccaccacccaatgtttcaagtagttctggacttatgggagtgcca
ccaccaaatatttcaagtagttctggacttctggcaatgcagcatccagctggggttcaa
aacatgcctcatttaaatattagtagtcaaaggatgcctggaatgcctctaatagatatc
cgtccaggcctagtgccccattcgcctggaccaaggtttccattaatacagccagtaatg
ccaccgcagcgtagtattcctcctccagcaatccttgatccatctcttcacccaccacct
cgaggtccttttcctccagcagatatttttaatcaaacagaaagaccttttggaacccca
ggaagacaaaatatcgatagcatttctaatccagagaaaagactaccacttggaggcgat
aacattcagcaggaannaaacagagattatcgctttcctccagtggaaaaccgagataac
cttaacagaccatctccagtggatgtcagagattctgttggacggccaccggttgatcca
agagagggtataggaaggcctccagtagatggaagagaacactttgccagaccacatgta
gacatgagagaaaactttggaagaccaggtatagacaaccttggtcgaagagagcatttt
ggttttaattcagataagcactgggggcagagaggagattatgatgaaagggagcaccat
gccttccctatttatggtggccctaaaagcttccatgaagacagagagaggtttcggcat
gtaaactataggtttgatagtagaagtggtcccaattggaatagaggatttgaacaagat
tctcacagagattttgatgaccgcagaagaccctgggaaagacagagggatagggatgac
agagattttaatttttgcagagaaattaatgggaacaggtttggaagagacagaatgtca
aacaactggatcccccctccacatccacgggtttttgaatattttgacggggccacttct
caacgcaaagccgataatatgccccaggtaaacggtgaaaatacagagacagaaagtcag
ccaccaactgcacaggtgcaggacgatccagaactttatgaaaaactgacatcttccatc
gagataaacaaagagaagagtgacacagaagctgatatagaaagtgaaccagtggtagaa
agcacagaaactgaggggacataa
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