Balearica regulorum gibbericeps (East African grey crowned-crane): 104633669
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Entry
104633669 CDS
T09009
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104633669 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breg03021
]
104633669 (CPSF3)
03019 Messenger RNA biogenesis [BR:
breg03019
]
104633669 (CPSF3)
Transcription machinery [BR:
breg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104633669 (CPSF3)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104633669 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104633669 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
Motif
Other DBs
NCBI-GeneID:
104633669
NCBI-ProteinID:
XP_010298244
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTLISFCRGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLI
SHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLE
ESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLM
AAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQEL
LLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHIS
NLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMS
EPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKA
ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN
FNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKLTGDVEEIEIQQKPALK
VFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQKAAVHKISKKVDMDV
YRKRMEIMLQDMFGEDCVSSKDGSVLCITVDGKTANISLDTRTVDCEPGSEDDESLREMV
ELAAQRLYDALSPVY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactttgatatccttttgcagaggtgctggccaagaagtaggaaggtcatgcattatt
ctggagtttaaaggaagaaaaataatgcttgattgtggaatccatcctggcctggaagga
atggatgctcttccatacattgatttgatagatcccgctgagattgatctcctcctaatt
agtcatttccatttagatcactgtggggctttaccatggtttttgcagaaaacaagtttt
aaaggaaggacatttatgactcatgccacaaaagctatttatagatggcttctttcagac
tatgtcaaagtcagtaatatatcagcggatgacatgctatatacagaaacagaccttgaa
gaaagcatggacaagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatc
aaattctggtgttaccacgcaggccacgttctgggagcagccatgtttatgattgaaata
gctggtgtgaagcttctctatacaggtgatttctcaagacaggaagacagacatctgatg
gcagccgagattcccaatattaaacccgatattcttataattgaatcaacgtatggtact
catattcacgaaaaaagggaagaacgagaggcaagattctgtaatactgttcatgacatt
gtaaatagaggaggtagaggtcttattcctgtgtttgccctgggtcgagctcaagaactg
cttttaattttagatgaatactggcagaatcatcctgaactccatgatatccctatatac
tatgcctcctctttggcaaaaaaatgcatggcagtttatcagacatatgtcaatgccatg
aatgacaaaatccgcaagcaaattaacatcaacaatccatttgttttcaagcatattagt
aatctgaagagtatggatcattttgatgatattggcccgagtgttgtgatggcttctcca
ggtatgatgcagagtggcttatccagagagttgtttgagagctggtgcacagataagaga
aatggagtaattatagcagggtactgtgttgaaggaacgcttgctaagcacataatgtct
gaacctgaagagatcacaactatgtcagggcaaaaactgccactgaagatgtctgtggat
tacatttctttctctgctcacaccgattatcaacaaactagtgaatttatccgggccctg
aaacctccacatgtgattttagttcatggtgagcagaatgaaatggccagattgaaagca
gcattgatacgggaatatgaggataatgatgaagttcatatagaagttcataatcctagg
aatactgaagctgtgacattaaacttcagaggagaaaaacttgccaaggtaatgggatct
ttagcagataagaaaccagagcaaggacagagaatttctggaatcctagttaaaagaaat
tttaactatcacatcctttctccatgtgacctttccaattatacagatttggcaatgagc
actgttacacagacacaagccattccatatactggcccttttaatctgctttattatcag
ctacaaaaacttactggtgacgtagaagaaatagaaatccaacaaaaaccagccctgaag
gttttcaaaaatattactgtgatccaggaaccaggcatggtagtccttgagtgggtggca
aatcctgctaatgatatgtatgcagacaccgtgacaacagtgatactggaagttcagtca
aatcccaaaatacagaaagcggcagtacataaaatttccaaaaaagtagacatggatgtg
tataggaagagaatggagatcatgcttcaagatatgtttggagaagactgtgtgagttca
aaagatggctctgtcctgtgcatcacggttgacggaaagactgcaaacatttcactggac
actcggacagttgattgtgagccaggaagcgaagatgacgaatcccttcgtgaaatggtg
gaactggctgcacagaggctttatgatgccctcagcccagtatactga
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