KEGG   Balearica regulorum gibbericeps (East African grey crowned-crane): 104634280
Entry
104634280         CDS       T09009                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
breg  Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03040  Spliceosome
breg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:breg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104634280 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104634280 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:breg03041]
    104634280 (PRPF19)
   04121 Ubiquitin system [BR:breg04121]
    104634280 (PRPF19)
   03400 DNA repair and recombination proteins [BR:breg03400]
    104634280 (PRPF19)
Enzymes [BR:breg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104634280 (PRPF19)
Spliceosome [BR:breg03041]
 Complex B
  Other components
   Prp19 complex
    104634280 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    104634280 (PRPF19)
Ubiquitin system [BR:breg04121]
 Ubiquitin ligases (E3)
  U-box type E3
   104634280 (PRPF19)
DNA repair and recombination proteins [BR:breg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104634280 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Vps41 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_ACSF4 PROPPIN Beta-prop_VPS8 Cytochrom_D1 eIF2A Beta-prop_DCAF12 RMC1_N Tricorn_2nd Beta-prop_WDR35_TULP_N DUF1830 GP3
Other DBs
NCBI-GeneID: 104634280
NCBI-ProteinID: XP_010299060
LinkDB
Position
Unknown
AA seq 358 aa
PFGRRINSRPSSASAALATLKPQAGLIVPQTVPSSQPNVAGAGESMDLGELAGMTPEIIQ
KLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQGASHVGLHSASIPGILALDLCPSDT
NKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVP
NASCVQVVRAHEGSVTGLSLHATGDYLLSSSHDQYWAFSDIQTGRVLTKVTDESSGCALT
CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS
SVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFT
NT seq 1075 nt   +upstreamnt  +downstreamnt
cccttcgggcgccggataaactcacggccttcctctgcctctgcagctttggcgaccctg
aagccgcaggctggcctcatcgtgccccagacggtgccgtcctcccagccaaacgtggcg
ggagctggggagtccatggatctgggagagcttgcgggcatgacccccgagatcatccag
aagctccaagacaaagctacggtgctgaccacggagcgtaagaagagaggcaagacggtt
ccggaggagctggtgaagccggaggagctcagcaagtaccggcagggcgcctcccatgtg
gggctgcacagcgccagcatcccggggatccttgccttggacctctgtccttccgacacc
aacaagatcctcaccggcggggctgataaaaacgtcatcgtttttgacaagagctcggag
cagatcctggcgacgctcaaggggcactccaagaaggttaccagcgtcgtcttccacccg
tctcaggatttggtgttctcagcttctcccgatgctactatccggatctggtctgtgccc
aacgcctcgtgtgtgcaggttgtccgtgcccacgagggctctgtcacggggctgagcctc
cacgcgacaggcgactacctcctcagctcatcccacgaccagtactgggctttctcggat
atccagacaggccgcgtcctcaccaaggtgacggatgagagctcaggctgtgctctcacc
tgtgcccagttccacccggacgggctcatttttggaacaggaacgatggactcgcagatc
aagatctgggatctgaaggaacgcaccaacgtggccaatttcccagggcactcgggcccc
atcaccagcatcgccttctccgagaacggctactacctggccacggcggcggacgattcc
tctgtcaagctctgggacttgcgtaagctcaagaacttcaagaccttgcagctggacaat
aactttgaggtgaagtctctcatcttcgaccagagcggcacctaccttgccctgggcggg
acggacgtccagatctacatctgcaagcagtggacggaaatcctccacttcacag

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