Balearica regulorum gibbericeps (East African grey crowned-crane): 104634560
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Entry
104634560 CDS
T09009
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104634560 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breg03400
]
104634560 (MSH2)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104634560 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104634560
NCBI-ProteinID:
XP_010299415
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
TQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQF
EEVLFANNDMSTAIGVVGVKLSTADGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALL
VQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEE
QMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALN
LFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPE
LRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALEKYEGAHQML
LLAVFITPLNDIYSDFSKFLEMIETTLDMDKVESHEFLVKASFDPNLTELREKMNELEEK
MQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKF
TNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHV
SSGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPN
MGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLE
TASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEHIASKICAFCMFATHFHELTALA
DQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALEL
EEFQNIGKSKESGGEPPAKKFYREREEGEKIIQDFLCQVKALPLTDMSEDDIKIKLKQLR
NDVLAKNNSFVNEIISRTKVTS
NT seq
2591 nt
NT seq
+upstream
nt +downstream
nt
gaactcagaagcttgagagtgtcgtgcttagtaaaatgaactttgaatcttttgtgagag
atctgcttttggttcgtcattacagagttgaagtttacaagaacaaagcagggagtaaat
ctatcaaagaaaatgactggtatttagcatataagggttctccaggaaatcttgcccagt
ttgaggaagttctctttgccaacaatgacatgtcaacagccattggggttgtgggggtta
agctgtctactgctgatggacaaagagtagtaggagtggggtatgtcgacactacactga
gaaaattgagtgtctgtgagtttccagataacgatcagttctcaaaccttgaagctctac
tggttcaactaggaccgaaggagtgtgtgctaccaggaggagagactgcaggagagatgg
gaaaactacgacaagtcattcagagaggaggaatcctgattacagacaggaagaaggcag
atttcacaacaaaagatattgttcaggatctcaatcgtttgttaaaatcaaaaaaagaag
aacaaatgaatagtgcagcattgccagagatggaaaagcaggttgctgtttcatctttgt
cggccattatcaagtttttagagctgctgtcagatgagtctaacttcggacagtttgaac
tgactactttcgatcttagtcagtatatggttctagataatgcagctgttcaagccctca
acctttttcagagttctgtggaaaatgctaatacggcacagtctctagctggtttactaa
ataaatgcagaacccctcaaggacaaagactagttaatcagtggattaaacaaccgctta
tggacaagaatagaattgaagaaaggttgaacttggttgaagcttttgtggtggatccag
agctgcgtcagtgccttcaagaagatctcttacgtcgcttcccagatcttaaccgactgg
caaagaaatttcagagacaagcagcaaacttacaggactgttaccgaatgtatcaggcta
ttaatcaactgcctaatgttgtacaagcactagaaaaatatgaaggagctcaccagatgt
tgttgttggcagtgtttataacacctcttaatgatatctactctgacttctcaaagtttc
tggagatgatagaaacaacattggacatggataaggtggagagtcatgaatttcttgtca
aggcttcttttgatcctaacttgacagaattaagagagaagatgaatgaactggaagaaa
aaatgcagtcctttttaaagagtgcagccaaagaactaggtttggaagctggcaaaagta
tcaaactggagacaaattcacagtttggacatcactttcgaataacttgcaaggaggaaa
aagttctccgtaacaattcaaaatatggaatagttgatacgcagaagaatggtgttaaat
ttactaacagcaagctgagctccgtcaatgatgaatatataaagaacagagaagagtatg
aagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggttatgcagaac
caatacagacgatgaatgatgtgatagctcaattagatgcaattgtcagttttgctcatg
tgtcaagtggagcaccagtgccctatgtccgtcctgtcattctggaaaagggacaaggaa
gaattgtgctgaaaggtgccaggcatccttgcatcgaagtgcaagatgaggtggccttta
tccccaatgacattacatttgagaagggcaagcagatgttccacattattactggcccta
acatgggggggaaatcaacctacatccgacagactggggtgattgttcttatggcccaaa
ttgggtgttttgtaccatgtgactctgcagaaataaccattgtggattgtatcctggctc
gggtgggagctggagacagtcagctgaaaggcgtgtctactttcatggctgaaatgttag
aaacagcttcaatccttaggacagcatctgaaaactccctgataatcattgatgagctgg
gaagaggaacttctacctatgatggctttggtttagcatgggctatttcagaacatattg
ctagcaaaatctgtgctttctgtatgtttgctacacattttcatgaactgacagctcttg
ctgaccaagtgccaacagtaaataacctacatgttactgctctgacaagcgatgatacgc
tcaccatgctttatcgtgtcaaagaaggtgtttgtgaccaaagttttggaatacatgtag
cagagttggcggctttcccaaaacatgtgatagaaagcgcaagagagaaggcattggagc
tggaggagtttcaaaacattggcaagtcaaaggaatctggaggagaaccaccagccaaga
aattctacagagaaagagaggaaggtgaaaagataattcaggattttctttgtcaagtga
aagcattgcccctgacagatatgtcagaagacgacatcaaaatcaagctgaaacagctga
ggaatgatgtgttggcaaagaacaacagttttgtgaatgaaatcatttcccgaacaaaag
ttacatcatga
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