Balearica regulorum gibbericeps (East African grey crowned-crane): 104634677
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Entry
104634677 CDS
T09009
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104634677 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
breg01009
]
104634677 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
breg04515
]
104634677 (PCDH1)
Protein phosphatases and associated proteins [BR:
breg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104634677 (PCDH1)
Cell adhesion molecules [BR:
breg04515
]
Cadherins
Protocadherins
104634677 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
K319L-like_PKD
TMEM154
Mid2
Syndecan
MLANA
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
104634677
NCBI-ProteinID:
XP_010299558
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
PLQRRMKPLASCLGLWLLFQLPALVSGTRVVYKVPEEQPPNTLIGSLASDYGFPDVGHLY
KLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLILNSSPR
LLEGQIEVLDINDNTPNFASPVLTLAIPENTNIGALFPIPLAMDRDSGPNGVASYELTAG
PEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITI
LDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLL
RLDRATGLITVQGPIDREDVNILKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIR
GIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGS
DSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSF
TEVAFPENNEPDDLVMEVSASDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVL
DREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSP
VGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDG
GDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNA
ELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHF
YVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVL
VVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEET
GLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKH
QVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQVGELILRPAAATPLHRGA
IWTEVWE
NT seq
3086 nt
NT seq
+upstream
nt +downstream
nt
ctcccctgcagcgcaggatgaaaccgctggcatcctgcctgggcctgtggctcctcttcc
agctccctgccctggtctctgggacgcgtgtggtctacaaagtgccggaggaacaacccc
ccaacaccctcatagggagcctggcctccgactacggcttcccggatgtggggcacctct
acaagctggaagtgggggccccgtacctacgtgtggacggcaagactggggacatctaca
ccacagagacctccatcgaccgggagagcttgcgtgagtgccagcacctcctgcccggag
agccctgcttcctggagttcgaagtgtccatcactgacctgatcttgaacagcagcccac
gcctgctcgaggggcagatagaggtgctcgatatcaatgacaatacccccaactttgcct
cacccgttctcaccctggccatccccgaaaacaccaacatcggggcactcttccccatcc
ctctggccatggatcgggactcgggccccaacggcgttgcctcctacgagctgacagctg
gtccagaggcgcaggagctctttgggctgcaggtggcagaggatcaggacgagaagcagc
cgcagctgattgtcatggggaacctggaccgggagcagtgggactcctatgacctgacca
tcaaggtgcaggatggaggcaacccaccgcgggcgagcagcgccctgcttcgcatcacca
tccttgacatgaatgacaatgcacccaagttcgagaaggccctttacgaggcggagctct
ccgaaaacagccctgtggggcactctgtcctccaggtgaaagccaatgactcggaccagg
gtgccaatgccgaaatcgactactccttccaccaagcctcagacatggtgcgccggctgc
tgcgcctggaccgtgccacggggcttatcaccgtgcaggggcccattgaccgcgaggacg
tcaacatcctcaagttctccgtcatggccaaggacaagggggccaaccccaagagcgccc
gcacccaggtggtcgtcaccatcaaggacatgaacgacaacgcaccctccatagagatac
ggggcattgggctcgtgacccaccaggatggcatggcgaacatctcggaggacgtgccag
tagagacagcagtggctctggtgcaggtgtccgaccgagatgagggtgaaaatgctgtgg
tgacctgcgtggtggctggtgacgtcccattccagctgcggcaggctagtgaaacaggga
gcgacagcaagaagaaatacttcttgcagaccaccacgccgctggactacgagtcggtga
aggagtacacaattgagattgtggcggtggactcggggaacccgcccctctccagcacca
actctttgaaggtacaggtgatggacgtcaatgacaatgcgcctgtcttcagccagagct
tcactgaggtggccttccccgagaacaatgagcccgatgacctggtgatggaggtgagcg
ccagcgatgctgacagtggctccaacgccaagctggtttactccttggtgacagacccct
cctccaagggctccttcaccattgaccccgactctggggagatccgggtgaaggcggtgc
tggaccgagagcagcgggaacgctatgagttcttggtggtggcggcagacaagggcagcc
ccagcctcaagggcacagcgtctgtggccatcaatgtcatggacaggaatgacaacgacc
ccaagttcatgctgagcggctacaacttctcagtgatggagaacatgccacccctcagcc
ctgtgggcatggtgacggtgatcgatgctgacaaaggagaaaatgcccgcatccagctgt
cagtggagcaagacaacggggattttgtcatccagaatggcaccggcaccatcctctcca
gcatctctttcgaccgggagcaacagagcacgtacactttccgactcaaggcggtggacg
gtggggatcctcctaggtctgcctacgtgggagtgaccatcaacgtcttggatgagaatg
ataatgcccccttcatcacttcaccctccaatgccacctacaaacacatcctgccccaca
ccagccctggccagcaggtgagcaaggtcaaggcagaggacattgactctggtgtcaacg
cagagctcacctacagcatcacaggaggcaatccctttgagctcttccagatctccccac
acagtggagacatcaccctggagaaggaaatcctgcgcaagcaccatggcctgcaccgct
tggtagtgcgtgtcaacgacaagggcaagccctcacggcacggcacagcgctggtgcact
tctacgtcaacgagacgctggccaaccgcacactgctggacacgctggtggggcacagcc
tggacacaccactcgacatagacatcgccggagaccccgaatacgagcgcagcaagcagc
gaagcaatatcctgtttggagtcatcgccggcatcgtggccgtcaccctggtcattgtgc
tggtcgtcctggtgcgctactgccggcagcgggaggccaagagtggctaccaggcaggca
agaaggagaccaaggacctgtatgcacccaagcaggccagcaagagtggtaagagcaaga
gcaaggtgaagaagagcaagtctccgaagccgcccaagcccacagaggatgaggaggaga
cagggctgcagaaatcgctcaagttcaacctcatgaatgactctgtcagcgacagccccc
gaatccacctgcccctcaactacccaccgggcagcccagacctgggtcgccactaccgct
ccaactcgccgctgccctccatccagctgcagccgcagtcgccctctgcctccaagaagc
accaagtggtgcaggacctgccggccaccaacacctttgttggcaccggggacaacaact
cgacgggctccgagcagtactcggactacagctaccgcaccaatccccagaaatacacca
acaagcaggtaggagagctcatcctgaggccggcagcggccacccccctgcaccggggag
ccatctggacagaggtgtgggagtga
DBGET
integrated database retrieval system
