Balearica regulorum gibbericeps (East African grey crowned-crane): 104635560
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Entry
104635560 CDS
T09009
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03030
DNA replication
breg03410
Base excision repair
breg03420
Nucleotide excision repair
breg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104635560 (RFC1)
03410 Base excision repair
104635560 (RFC1)
03420 Nucleotide excision repair
104635560 (RFC1)
03430 Mismatch repair
104635560 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breg03032
]
104635560 (RFC1)
03400 DNA repair and recombination proteins [BR:
breg03400
]
104635560 (RFC1)
DNA replication proteins [BR:
breg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104635560 (RFC1)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104635560 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_14
AAA_30
Rad17
PTCB-BRCT
AAA_22
BRCT_2
AAA_5
RNA_helicase
RuvB_N
AAA_17
AAA_16
AAA_18
AAA_33
AAA_7
nSTAND3
AAA_19
NgoMIV_restric
Motif
Other DBs
NCBI-GeneID:
104635560
NCBI-ProteinID:
XP_010300714
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAATHGGSDTSQDIRKFFGVVPSGKRQECETVKSEKIKNGEGPSSGKKKGKETKVNNSPS
EDDSKQKRTKKKKRIIYDSDSEEEVQSVKKSKKPSERKTATSKLGKVLKQDPVVYISETD
EEDDFVNKRISLKPKENGTSAIGCPGTTTVKKEDVKPRPKSKPLSPVKQTPTSALDYFGT
SSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDTELERQLHEDEEFAKTLAML
DETPQKKKARRDSGGEQTVLSIKSSPNMTERCKQSERAMNSTGETKNYTAKQQTKSEHSK
GSRLSSQPSDGKIARELMDNTLPLKPSSKLVSLKQKEEIAEKERGAQSLVSKEKTASRKE
EKTTPKKEKISPKKTESISPEDSEKKRINYQAYRSFLNREGPKALGSKEIPRGAENCLEG
LTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKREKASTLGTKI
IDEDGLFDLIRTMPGKKSKYELAAETEVKKVESRPKKTPQKAEAGKRNFSPFKRDVVNKK
QKSTPEKGDTIKSVKKETTAARKLLDFKRQTTEKKEAPKSNGNSVSEINEGETERLLWVD
KYKPASLKAIIGQQGEQSCANKLLRWLRNWHKNASEDGQAKTNKTGGKDDGTGFKAALLS
GPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSV
SGKHVLIMDEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNNPKIRSLVHYCFDLR
FQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYD
EAKTDARRAKKDIRLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVH
VKPAAAGGNLKKHLVLLSRAADSICDGDIVDRQIRSKQNWNLLPTQAIYASVLPGELMRG
YMSQFPVFPSWLGKFSSTGKHDRIVQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQPLK
DFGADGVQEAITLMDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAH
LTPYSLNSVKTSKRQSGSAVTLELNEDLNAEEIQSDEDGQDTVENDAMIKQKKAKSSKLP
KREKNEETTKKEGKRKEKTRHQTE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacccatggaggtagtgataccagccaggatatccggaaattctttggtgtt
gtaccttctggaaagcgacaggaatgtgagactgtgaagagtgaaaaaattaaaaatggt
gaaggaccttcaagtgggaagaaaaagggaaaggagactaaggtgaataattcacccagt
gaagatgattccaaacaaaagcggacaaagaagaaaaaaagaataatctacgattcagat
tcagaagaggaggtgcagtcagtgaaaaaatccaagaagccatctgagagaaaaacagct
acttcaaaacttggtaaagttctaaagcaggatcctgttgtttatatttcagagacagat
gaagaagatgactttgtcaataaaagaatttccctgaaaccgaaggagaatgggacatca
gcgattggttgtccaggaacaactacagtgaaaaaggaagatgtaaaaccacgacccaaa
agcaagccattatctccagtgaaacagactcccacatcagcacttgattacttcgggaca
agtagtgtccaacgatcagaaaagaagctggtagcaagtaaaaggaaagaaccctcacaa
agcagagacagcacactggatgatgaggctattgctaggcaactgcagcttgaagaagat
acggagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatgttg
gatgaaacaccacagaagaaaaaggctcggagagattcaggaggagagcaaacagtattg
agcatcaagagcagtcctaacatgacagaaaggtgtaagcagtcggaaagagcaatgaac
tcaacaggtgaaacaaagaattacactgcgaagcagcaaactaaatctgaacattcaaaa
gggtctcgtttatcctcacaaccatctgatggtaaaatcgcaagagagttaatggataac
accttgcctttgaaacctagctctaagcttgtgtctctgaagcaaaaagaagagattgct
gaaaaggaaagaggtgctcaaagcttagtatcaaaagaaaaaactgcttcaaggaaagag
gagaagacaacaccaaagaaggagaaaatttctcccaagaagactgagtccataagtcct
gaggactccgaaaagaagcgaatcaattatcaagcctaccgaagcttccttaatcgcgag
ggtccgaaagcgctgggttccaaagagatacctcggggggctgaaaactgcttggaaggc
ctgacattcgtaattacaggcgttttggagtgtattgaaagagatgaggccaagtctctg
attgaacgttacggaggaaaagtaactggcaatgtcagcaagaagacaaactatctggtt
atggggcgagactgtggccaatcgaaacgtgaaaaggcatcaactttagggactaaaatt
attgatgaggatggcctgtttgatcttattcgaactatgccaggcaaaaagtccaagtat
gagctggcagctgaaacagaggtgaagaaagtagagtcaagacctaaaaagacaccacag
aaagctgaagctggaaaaaggaattttagccccttcaaaagggacgtcgttaataaaaaa
cagaagtctactcctgaaaaaggagataccatcaaatctgttaagaaagaaaccactgct
gctcgaaagcttctggactttaaacggcaaaccacagaaaagaaagaagccccaaaatct
aatgggaactcagtttctgaaattaacgaaggcgaaacagagagattgctatgggtagat
aaatacaaacctgcatctcttaaggcaataattggacagcagggtgaacaaagctgtgcc
aataaactgctccgatggctccgaaattggcacaagaatgcctcagaagatggacaagca
aagaccaataaaactggaggcaaagatgatggtactggttttaaagcagcattactttct
ggtccacctggagttggtaaaactactacagcttctttggtttgtaaggaactggggtat
agctatgtggagctgaatgccagtgacactcgcagtaagaacagcctaaaggaagtagtt
gctgaatcgctcaacaacaccagcatcaaagacttctgttccggcacatcctcatcagtt
agcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagacaga
ggagggattcaggaattgattggtttgattagacacacaaagatacccatcatctgtatg
tgtaatgatcgcaacaatcctaaaattcgttccttggtccactactgttttgatcttcgt
tttcagagacctcgtctagaacagattaagggtgccatgatgtctattgcatttaaagaa
ggtttaaaaatcccaccacctgctatgcaagagataatcctggcagcaaatcaggacatc
agacaggttttacataatcttaatatgtggtgtgcaaaagataaatcattgacttatgat
gaggctaaaacagatgcccgcagagccaaaaaggatatcagactgggcccttttgatgtt
gtccggaaggtttttgctactggagaggaggcttctcgtatgtctcttatagacaaatca
gatctcttcttccatgattattccctagcacctctctttgtccaagagaactacgtacat
gtgaaaccagctgctgctggaggaaatctgaaaaagcacttagtgctcttgagtagagca
gctgatagtatatgtgatggtgatatagtggacagacagattcgtagcaagcaaaactgg
aatcttcttccaacacaggccatttatgcaagtgttctcccaggggagctgatgagaggt
tacatgtcccagtttcctgtctttcccagttggctggggaaattttcatccacaggcaaa
cacgatcgtatcgttcaagaactggcaatgcacatgagcctcagaacccagacgtgcaag
aggacagtaaatatggagtatctgtcatatttacgggatgcgcttgtccagcccttgaaa
gactttggagcagatggtgtacaggaagctataacgttgatggactcttactgcttgatg
aaagaagatattgaaaatatcatggaaataagcacgtggggagggaaacccagtcctttt
tcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaacaaagaggcacat
ctgactccatattcacttaattctgtcaagacatctaaaaggcagtcaggatctgcggtg
accttagaactgaatgaagacttgaatgcggaagagatccaatctgatgaagatgggcaa
gatactgttgaaaatgatgcaatgattaagcaaaaaaaggcaaagtcttccaagctgccg
aaaagagagaaaaatgaagaaacaacaaaaaaagaagggaagagaaaagagaaaacaaga
catcaaacagaataa
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