Balearica regulorum gibbericeps (East African grey crowned-crane): 104635575
Help
Entry
104635575 CDS
T09009
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03030
DNA replication
breg03420
Nucleotide excision repair
breg03430
Mismatch repair
breg03440
Homologous recombination
breg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104635575 (RPA1)
03420 Nucleotide excision repair
104635575 (RPA1)
03430 Mismatch repair
104635575 (RPA1)
03440 Homologous recombination
104635575 (RPA1)
03460 Fanconi anemia pathway
104635575 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
breg03000
]
104635575 (RPA1)
03032 DNA replication proteins [BR:
breg03032
]
104635575 (RPA1)
03400 DNA repair and recombination proteins [BR:
breg03400
]
104635575 (RPA1)
Transcription factors [BR:
breg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104635575 (RPA1)
DNA replication proteins [BR:
breg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104635575 (RPA1)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104635575 (RPA1)
MMR (mismatch excision repair)
104635575 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104635575 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
104635575
NCBI-ProteinID:
XP_010300731
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGEDVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQ
CICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEGQGQQRSLPPAANP
PPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASAPSSVKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSISDLENTPKDSI
VDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAS
GANTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQEAAEFILGQNAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLITSIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggaggatgtctccaagcctgtgctgcaagtcatcaatacgcgggctattgct
acaggaaacgggccaccgcgttaccgagtgttgatgagtgacggagttaacacgctctcc
tctttcatgttggcaacgcagctgaactctctggtggaagaggaacgcttatcagcccaa
tgtatttgccaggttaacagattcattgtcaacagtctgaaagatggaaggagagtggtt
atactgatggatttaaatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccggtgccgtacaatgaagggcaagggcagcaacgttctttgcctccagcagcaaaccca
ccacccagcaaaccacagcaacaaaacggcaatttgtcagtagcaggtcctgctgctccg
aagtaccatgctccctcaaaccagtttggtaaagcaagcgctcccagctcagtgaagaca
ccaggggggtctcaggccaaagtagtgccgattgccagcttgaacccctaccaatctaag
tggaccatttgtgctcgtgttacccaaaaaggtcagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttttctatagagctggttgatgaaagcggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgagtttgtatccatctctgacttggagaacacacccaaagactcaatt
gttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtgaaagct
aacaatagggaggtatcaaagaggaatgtgcatctgatggatacatcagggaaactggtg
acagctacgctatggggaaatgaggctgaacagtttgatggttctagacaacctgtgata
gccatcaaaggagcccgagtctctgatttcggtggtagaagcctgtctgtcctgtcctca
agtacagttgtcatcaaccctgatagcccagaggcttttaagctccgaggatggtttgat
tccgaggggcagcttctggaatgtgcctcgatctctgatgtgagaggtgggccagcgtct
ggggcgaacaccaattggaaaaccttgtttgaagccaaatctgagaacttgggacaagga
gataaggcagattattttagttgtgtgggcacagtcgtacatctgcgcaaagagaactgt
atgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaaaatgga
ctgtatcgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctggtgaccattgcagactgtctagagtatcagtgggtgacttgtttccaagaggcagca
gaattcattcttgggcaaaatgcagctttcctgggagaactgaaggaaaagaacgagcag
gcgtttgaagaagtgttccaaaatgcaaacttcaacacgtacgagttcaggatccgagta
aaactggagacttacaatgatgaatctcgtattaaggctacagcagtggatgtcaaacct
gtgaactacagagaatacagcaagaggctgatcacaagcatcaggagaaatgctcagcta
gggtga
DBGET
integrated database retrieval system
