Balearica regulorum gibbericeps (East African grey crowned-crane): 104635862
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Entry
104635862 CDS
T09009
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03013
Nucleocytoplasmic transport
breg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104635862 (UPF2)
03015 mRNA surveillance pathway
104635862 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breg03019
]
104635862 (UPF2)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104635862 (UPF2)
mRNA cycle factors
P-body specific factors
104635862 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104635862
NCBI-ProteinID:
XP_010301147
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPANMEEKESLLNNKEKEFSERRPVSTREKSKEDAKVGVKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKQEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSSKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQDLEREFLIKLGIVNDKDSKD
SITEGENMEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctctgttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagtcaaaagaagat
gccaaggttggcgtgaagagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagaggaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacaagaggaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaacgcaccagacaatcgccctgaggagaacttcttc
agcagactggattccagtctgaagaagaacacggcttttgttaagaagctaaaaaccatt
acagagcaacaaagagactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgctatgctgattttgctccttccctactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcaacttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaagaaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacatctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactctaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcttatcagaagctgttggcaaattctcaatctctggctgatcttttggat
gaaaatatgcctgatcttccccaagagaaaccgacacctgaggaacatggacctggtata
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagac
gaagatgctagaaacttctatgagaatctcattgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttcccagaacaaggattccagcaaagatgaatcaaga
gattcaaaagatgccaaagataataaggaagcacctggcagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcctctggagttagactgtggagacgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagaacaagaagatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcagcttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactagtgcgagcacttttcatagttcctagacaaaggttggatttgctaccattt
tatgcaagactggttgccacattgcatccctgtatgtctgatgtagcagaggacctttgt
tccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgaacttaccaagtttaagatgttctccaaa
aatgatactctccactgtttaaagatgcttctgtcagacttttctcatcaccatattgaa
atggcatgtactctgttggaaacctgtggaagattcctctttagatcaccagaatctcac
ttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatctagat
gcacgctatgttacaatggtggaaaatgcctactactactgtaatcctcctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctttacaag
gatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaacgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggttctttaccaggaagatgtc
ggaatccatgttgtggatggagtgctagaggatattcgactgggaatggaggttaaccaa
ccaaagtttaaccagcggcgaatcagcagtgccaagtttttgggggagctttacaattat
cgaatggtggaatcagccgtaatatttcgaactctgtattctttcacatcatttggtgtg
aaccctgatggtagtcctagtccactggatcctccagagcatcttttcagaatcagacta
gtctgtacaatcctcgatacctgtgggcagtattttgacagaggatctagcaaacggaaa
cttgattgcttcctcgtatattttcagcggtatgtttggtggaaaaaaagcctggatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactggag
ctgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtgcaa
gacttggaacgagaattcttaataaaattgggaattgtgaatgacaaagattccaaagat
tccattacggaaggagagaatatggaagaagatgaggaggaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggttct
gacaatgaggaagaagaaggtgaagaagaggaggaagaaaacacagattatcttacagac
tccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggaggaggc
cttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatgatg
ctggaaaatcttcagcaacggagtggtgaatctgttaaagtacatcagctggatgttgct
attcctctgcatctcaaaagtcagctcaagaagggtcccccacttggaggtggagaagga
gagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaacag
cagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaaccaa
cagcaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaatgaa
cggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaactggtgggaggagacgttga
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