Balearica regulorum gibbericeps (East African grey crowned-crane): 104637312
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Entry
104637312 CDS
T09009
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104637312 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
breg01009
]
104637312 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
breg04515
]
104637312 (PCDH20)
Protein phosphatases and associated proteins [BR:
breg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104637312 (PCDH20)
Cell adhesion molecules [BR:
breg04515
]
Cadherins
Protocadherins
104637312 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
He_PIG
Motif
Other DBs
NCBI-GeneID:
104637312
NCBI-ProteinID:
XP_010303055
UniProt:
A0A087VH87
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
HLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLARDLHLPMAGGQRPAAPQP
PLSFTLASRGLGGQYVQLDNRSGELHTSAMEIDREALCVESSEATVFGGAAAVSSSSSPS
SESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIRLSVPENAPVNTRLAIEH
PALDPDVGTNSVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGALDRETREEYVTVIVA
EDGGTPPLMGSATLTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVHAVDMDLGSN
AQITYSYSQKVPQSSRDLFHLNESTGIITLSSKVDGDTPRLHRLIILGNGPGCIPAVITV
LVTIIKVMMRPPEVVPRFIANEAEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGD
GPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHVNKIIKVQVLDDNDNS
PVFSQQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKTTGVLT
VSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENF
PGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYILWI
EAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDK
DTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEP
LHSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPAHKKMESASCMPTLVA
LSIISLGSIALVTGMGIYICLRKGKNHHRADENLEVQIPLNGRINLHVLEKRPMEISNI
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
cacttgctcctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgc
gccactgagctcttctacagcctcaacgaggggctgcccgcgggggtgctcatcggcagc
ctggcccgtgacctgcacctgccgatggctggtgggcagcgccctgcagccccccagccc
ccactctccttcactctggcctcgcgtggcttggggggacagtatgtgcagctggacaac
cgctccggagagctgcatacctcagccatggagatcgaccgggaagcactgtgcgtggag
agcagtgaggccactgtctttgggggagcagctgctgtctcctcctcctcctctccctca
tctgagtcatgcctgctgctgctggatgtgctggtgctgccgcaggagtacttccgccta
gtgaaggtaaaaattgctatccgggatgtcaacgacaatgcaccccgcttccctgtgccc
cacatccgcctctcagtgcccgagaatgcacctgtgaacacccgcctggctatcgagcac
cctgcccttgaccctgatgtgggcaccaacagcgtccagacctaccgtctgcgagataac
tacggtgtcttcaccctggatgtggaggagaatgagagcggggagaggactccgtacctg
attgtcatgggggctctggacagggagacacgggaggagtatgtcacagtcatcgttgct
gaggatggggggactcctccgctcatgggcagtgccaccctcactattggcatcagcgac
atcaatgacaactgcccccagttcagcgactcacaactcaatgtcactctttatgggaat
tccagtctagggacacacgtggccactgtccacgcagtagacatggaccttggatccaat
gcccagatcacctactcctacagccagaaagtcccccagtcatccagagacttgttccat
cttaacgaaagcacaggaatcatcacgctgtccagtaaagttgatggggacactccaaga
ctccacaggctgatcatattgggcaacggtcctggttgtatccctgccgtgatcacagtg
ctagtgaccatcatcaaagtcatgatgaggccacctgaagttgtccctcgtttcatagct
aatgaagcagaaggagtggtatacttaaaggaactggagcctatcaacacgccgatagca
ttttttaccatcaaagaccctgatgaaaaatacaaagtcaattgctatttggatggtgat
gggcctttcagactttcaccatacaagccatacaataatgaatacctgttagagaccaca
aagcctttggactatgagacacagcagctgtatgaaatctctgtagtcgcatggaactca
gaaggatttcatgtcaacaaaataatcaaagtacaggtactggatgacaatgacaactcc
ccagttttctctcaacagctgatagaattatctattgaggagaacaatgttcccaatgct
ttcttgaccaaactgcatgctacagatgctgacagtggagaaagagggcaagtgtcttat
tttttagggcctgatgccccttcctatttttctttagataaaaccacaggagttcttaca
gtttccacccagctggacagagaagaaaaagagaaatacagatacactgtcaaagcagta
gattctgggttccctccaagagaatcaatagcaactgtcaccatcactgtattggataaa
aatgataacagtccaagatttatcaataaagatttcagcttttttgtgccagaaaacttt
ccaggttttggtgaaattggagttataagtgtcacagatgccgatgcagggcaaaatgga
tgggttgccctttcagttctgaatggaagtgatatttttgttatagatactggaaaagga
gttctgagagctaaagtctccctggacagggagcagcaaagctcctacattctgtggatc
gaagcagttgatggtggtgatcctgccctctcctctactgcaaaaataactatccttctt
ctggacataaatgacaacccccctttggtcttgtttcctcaatctaatatgtcttatttg
ttggtccttccttctacccttcctggctctcccatcactgaggtctatgctgtcgataag
gacactggcatgaatgcagtcatagcttacagtatcataggaagaagaggccctcgacca
gagtcatttaggattgatcctaaaactggtaatatcaccttggaagagtcactgatgcaa
aatgactatggcctctatcggctgcttgtgaaagttagtgatcatggctatccagaacct
ctccattccaccgtcatggtgaacctttttgtcaatgacactgttagcaatgagagctac
attgaaagtttgttaagaaaggagcctgatatcagtatagaagaaaagcagccacaaata
tccatagagcctgcacataaaaaaatggagtcagcatcctgcatgcctaccttggtagct
ctgtcaatcataagcttgggttcaatcgctttagtaacagggatgggcatttacatctgt
ctaaggaaaggaaaaaaccatcacagagcagatgaaaacttggaagtacaaatcccatta
aatggaagaattaacctgcacgtgttggagaagagacccatggagatttctaacatttga
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