Balearica regulorum gibbericeps (East African grey crowned-crane): 104637714
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Entry
104637714 CDS
T09009
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104637714 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breg03400
]
104637714 (LIG3)
Enzymes [BR:
breg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104637714 (LIG3)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104637714 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
104637714
NCBI-ProteinID:
XP_010303608
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVNCMFEKL
EKARATTKKIEDITDLEGWEELQDGEKELINKHISEANSKAASTPKKKVIVQAKLTATGQ
LTTKDPLALITPSPKKFSGFTAKPKNSEDVSANSSHKSSLSAKKCDPKHKDCLLREFRKL
CAMVAEKPSYNVKTQIIQDFLKKGSGGDGFHGDVYLTIKLLLPGVIKIVYNLNDKQIVKL
FSRIFNCSQEEMVRDLEQGDVSETIRLFFEQSKSCPPAAKSLLTIQEVDEFLIQLSKLTK
EDDQQSVLQHITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNLQD
VVERVLMNQQEAEKMPGLKRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKY
DGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSMILDSEVLLIDNKTG
KPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIL
FSEMKHVTKASDLADMITRVIREGLEGLVLKDIKGNYEPGKRHWLKVKKDYLNEGAMADT
ADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDDATLARLQTELDMVK
ISKDPSKIPRWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTR
IRDDKDWQTATNLQQLKELYQLSKEKADFNVVAGEEDESTAGSSGENEGNSRSSTPHSTI
KTPPSKSPAKAQKPEESKAVIRSPQKSEEKRGEKRKASEMDDNGKKMLLDIFTGVKLYLS
PSVKDFDKIRRYFIAYDGDLVPEFDTASATHVIGDIDENPGAKRVSPNWIWECIRKRRLV
APC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagaggtactgcgtagattatgccaagcgtggcacagcaggctgcaagaaa
tgcaaggagaagatcgtgaaaggaatggtgcgcattggaaagattgttccaaatcctttc
acggagtctggcggggacatgaaggagtggtaccatgtgaattgcatgtttgagaagcta
gagaaggcccgggccaccaccaagaaaattgaagacatcacagacttggaagggtgggaa
gagctacaagatggggagaaagagttaatcaacaagcacatctcagaagctaattccaag
gctgcaagtacaccgaagaaaaaagtgatagtccaagctaagctcactgccacaggacaa
ctaaccacaaaagatccattggctctcatcactccatcaccaaagaagttctctggtttc
acagccaagccaaagaattcagaagatgtctctgcaaactcttcccacaagtctagctta
tctgcaaaaaaatgtgatccgaagcacaaagactgcttgctgcgagagttcaggaagctc
tgtgccatggttgctgaaaagccgagctataatgtgaaaacgcagatcattcaggatttt
ctgaagaagggatctggaggagatggttttcatggtgatgtatacctgaccattaagctg
ctgttaccaggcgtcattaaaattgtttacaacttgaatgataagcagattgtaaagctg
tttagtaggatttttaactgcagccaagaagaaatggtccgggacctggaacagggagat
gtttccgagaccatacgcctcttctttgaacagagcaagtcttgtcctccagcagccaaa
agtctcctgacgatccaagaggtagatgaattcctaatccagctatccaagcttacaaag
gaggatgaccagcaaagcgtgctgcagcacatcactcgcagatgtacgggcaacgacctg
aaatgcatcatcaggctaattaagcatgacttaaaaatgaatgctggagcaaagcatgtg
ttggatgctttggatcccaatgcttacgaggcgttcaaggcatcacgcaacctccaggac
gtggtagagcgagtcctgatgaaccagcaggaggctgagaagatgccaggtctgaagcga
accctcagtgtgcaggcctctctgatgaccccggttcagcccatgctggctgaagcttgc
aagtcaattgagtatgccatgaagaagtgcccaaacggcatgtatgcagagatcaaatac
gatggtgagcgcgtgcaagtccataaaaatggagatcatttcagctacttcagcagaagt
ctcaaacctgtcctcccacataaagtagcccattttaaggacttcatccctcaggctttc
cctggtgggcaaagtatgatcctggattcagaagttcttctgattgacaacaaaactggc
aagccacttccttttgggactcttggtgtacacaagaaagctgctttccaagatgccaac
gtttgcctgtttgtgtttgactgcatctatttcaatgacatcagcctgatggacaggcct
ttgtgtgaacgtcggaagtttctccacgacaacatggttgaaatcccaaaccggatcctc
ttctcagagatgaagcacgtcaccaaagcttcagatctggcagacatgattacccgagtc
atccgtgagggactggaaggactggtgttgaaagatataaagggtaattatgaaccagga
aaacgacactggctgaaagtgaaaaaggactacctaaatgagggtgcgatggctgacaca
gcagacctggtggtgctgggagctttctatggacaaggcagtaaaggtgggatgatgtcc
atcttcctcatgggctgctatgatcccaagagtgagaagtggtgcacagtgaccaagtgt
tccggtggccacgatgatgccaccttggcacgtctgcaaacagagctggatatggtgaag
atcagcaaggatcctagtaaaattccaaggtggctaaaaattaacaaaatctactaccca
gacttcattgtcccagatccaaagaaagccccagtgtgggagatcacaggggctgaattc
tctaaagctgaagcccacactgcagatgggatctccattcgcttccctcgttgcacccgc
attcgagatgacaaagactggcagacagccaccaacctccagcagcttaaggagctgtac
cagctctccaaagagaaggctgatttcaacgttgttgctggggaggaagatgagtccacg
gctggcagcagtggagagaatgagggaaattccaggtcttccacaccacacagcactatt
aaaactcccccaagcaagtcacctgcaaaagcccagaagccagaagaaagcaaagcagtc
atcagatcccctcaaaaatcagaggagaaacgaggggagaagcgaaaagcatctgagatg
gatgacaatggaaaaaagatgctgctggacatattcactggtgtgaagctgtacctatcg
ccctctgtgaaggacttcgacaaaatccgacggtacttcatagcatatgatggggatctt
gtgccggagtttgacacagcctcagcaacgcatgttataggggacattgatgagaatcct
ggtgctaagcgtgtgtctcccaactggatctgggaatgcatccggaaacggagactggta
gccccatgctag
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