Balearica regulorum gibbericeps (East African grey crowned-crane): 104638621
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Entry
104638621 CDS
T09009
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04510
Focal adhesion
breg04512
ECM-receptor interaction
breg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104638621 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104638621 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104638621 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
breg04147
]
104638621 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
breg00536
]
104638621 (COL4A4)
Exosome [BR:
breg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104638621 (COL4A4)
Glycosaminoglycan binding proteins [BR:
breg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104638621 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104638621
NCBI-ProteinID:
XP_010304760
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MALTKDSFEQIKWLITAAWWLLIVFSAQEIDGGGYAYIHPCGEQDCSVCRCFPEKGSRGQ
PGELGPQGPIGSLGSTGPAGLPGEKGRRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNSVYVSQFGKGPP
GDRGDPGPPGMPGPRGSRGTTGPSGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DIGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKGNPGSYGPAGFPGMKG
DPGEKGPPGLPGAVGTPLLPVKGPQGDPGFPGPAGDVGAAGPIGPAGLLGRPGDDGTSLP
GLPGVSGAPGPQGFQGDPGFPGTGESIPGRPGFPGPPGLPGQPGRQGLPGLPSVVCTDRG
IPGEPGAKGQIGLPGRKGEKGEKGNQGLCSCSAGPPGPRGMQGPPGTPGKKGQMGYPGRH
GEKGDPGLSGAMGSPGLPGTPGSAGQHGEKGEKGDPGRVRIKGLKGERGPTGVPGFPGQR
GNDGRDGELGLPGEKGAEGDSGVPLPGDKGFPGIPGLPGIKGQMGLPGVGFPGPPGVRGS
PGDFGDTGSIGPPGPKGQKGETVRITLPYPGNPGPPGFKGVQGPKGLKGLPGHPGPNGFD
GQKGHRGRPGAGIPGPEGFRGKAGDPGDEGERGSTVDGKNGPPGPPGIDGQKGVPGDTTY
GPPGIPGNRGLPGRPGAQGARGDPGVPGLRGQSGTPGFPGAKGFRGPEGDIGAPGCPGFP
GPPCDTGLPGPPGRRGVRGLPGPQGLPGFKGQRGDRGLAGPPGSKGLQGSPGSQGAPGPP
GSRGIPGLPGEKGPPGFPGQAGSKGIQGPQGFPGLPGTQGPMGISGVKGEEGKMGPPGPS
GECGDMGMKGERGPPGDSGCVNIRLEKGQKGEPGFPGENGFRGERGEKGNTGFRGTPGFP
GKNGVPGLPGDHGDTGLMGFPGSRGFPGPKGFKGITGFQGQPGDQGDVGLPGIPGNPGLT
GPKGSKGKRGDPTPVLGIHGRKGPPGDPGLPGPCGFPGEKGSPGIQGQPGRSGSKGDPGY
PGIPGLPGATGPQGLPGEPGEKGKHGILGPTGLQGLAGSQGRKGLPGLPGLDGLDGLKGQ
KGSSGAPGQSETGPPGYSGELGPKGDRGEPGWPGISIPGPPGERGFPGFPGRRGPVGPTG
PMGRSPDSASPGPPGDQGPPGLDGIRGQPGNPGPPGETVFVQGDPGDIGIQGAPGNPGQR
GQQGGRGLPGSQGRRGLKGPMGIHGPQGPPGAIGQPGDQGFQGKPGPRGPTGTHEPVAHC
DPGEPGKIDDSCPAIPGPPGEAGQRGDDGSVGLPGAIGHPGPQGRKGEEGSCGLPGQDGL
PGAPGPPGDQGNIGEQGYAGPQGPPGQTGIPGPPGSHIRSASGFLLVLHSQSDREPLCPQ
GMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASRNDKSYW
LSSAAPLPMTPLSEEEIQPYISRCAVCEAPAQAVAVHSQDQSIPPCPVNWRSLWIGYSFL
MHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVMPELQFA
SAPLSGTLKEGQEQRKKISRCQVCLKHS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcgtttgaacagattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatatgcatatattcaccca
tgtggggaacaggattgttcagtttgccggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctcggacctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggacggagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttccaggtttagatggtgttcctggttta
ccaggaagtgaaggacccaggggcaagcgtggtttagacggctgcaatggctcaagagga
gatccaggatttccaggagaaaatggttatattggaccaagaggtccttacggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtatgtttcacagtttggaaaaggacctcca
ggagacagaggtgatcctggaccccctggcatgcctggacctagagggtcaagaggtacc
acaggcccatctggatacccaggccaaccaggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggatggacaaaagggggaaccgggc
gacattggacttcccgggccacctgggtcaccactgctagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtaacaggatacagagggcca
cgtggacccaaaggtaatcctggttcttacggacctgcaggttttcctggaatgaagggg
gatccaggagaaaaagggcccccaggtcttcctggagctgttggaactccgctgcttcct
gtaaaaggtccacaaggagatcctggatttccaggtcctgctggtgatgtgggggcagct
ggaccaattggtcctgcaggcctgctaggaagaccaggagatgatggaacaagtctgcct
ggcctgccgggagtaagtggggcaccaggaccccaaggttttcaaggtgatcctggtttc
cctggaacaggtgaatcaatcccaggaagacctggatttcctggaccaccaggcctacca
ggacagccaggaagacaaggcttgcctggactgcccagtgtagtctgtactgacagaggg
atccctggagaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaa
ggagaaaagggaaatcaaggcctttgctcatgcagtgctggtcctcctggtccccgtggt
atgcaaggacctccaggtactccaggaaagaaaggacaaatgggataccctggaagacat
ggagaaaagggcgatccaggcttatctggtgcaatgggatcaccagggcttcctgggaca
cctggttctgctggacaacatggtgaaaaaggagagaaaggtgatccaggaagagttaga
ataaaaggactaaaaggtgaaagaggtcctactggggttccaggatttccaggccaaaga
ggtaatgatggcagagatggagaactaggactacctggggaaaaaggagctgagggtgat
tctggagtaccactgccaggtgataaaggattccctgggatcccaggacttcctgggata
aaaggacagatgggattgcctggtgtggggtttcctggcccaccaggagtcagaggcagc
cctggagactttggtgatactggtagtattgggccacctggtccaaagggccagaaaggt
gagactgtccgcattacattaccataccctggaaatccaggtcccccaggttttaaaggt
gttcaaggaccaaagggtttaaaaggactccctggtcatcctggaccaaatggctttgat
gggcaaaaaggccatcgaggcaggccaggagcaggaattcctgggccagaaggctttcga
ggcaaagctggtgatcctggtgatgaaggtgaaagaggatctacagttgatggtaaaaat
ggccctccaggtccacctggcatagatgggcagaaaggtgttccaggtgataccacgtat
ggtcctccaggcatcccaggcaacaggggactgccaggccgccctggtgcacaaggagca
aggggtgatccaggcgttcctgggcttcgaggacagtctggtacaccgggatttccaggt
gccaaaggttttagaggcccagaaggtgatataggagcaccaggctgtccaggcttccct
ggtccaccgtgtgacacaggcttaccggggccaccaggacgcagaggtgtcaggggcctg
ccaggacctcaaggcttaccaggctttaaaggtcagaggggagacaggggcctagctggg
ccacctggaagcaaaggtctccaaggctctcctggctcacaaggtgccccaggccctcca
ggctcccgaggaattccaggacttccaggtgaaaaaggaccacctggtttcccaggacaa
gcaggaagcaaagggattcaaggaccccaaggattcccaggactcccaggaacacaaggc
ccaatgggaatctctggtgtaaaaggtgaagaaggaaaaatgggtccacctgggcctagc
ggagaatgcggggatatgggaatgaaaggtgaaagagggcctccaggagacagtggctgc
gttaacatccgtcttgagaaaggacaaaagggggaaccaggatttcctggtgagaatgga
tttagaggtgaaagaggtgaaaaaggcaatactggtttcagaggcaccccaggatttcca
gggaagaatggtgtcccaggactgccaggtgaccatggtgacaccggactgatggggttt
ccaggatcgcggggttttccgggaccaaagggctttaaaggaattacgggttttcaagga
caaccaggtgaccagggtgatgttggcttaccaggaatccctggaaatccaggactgact
ggcccaaaaggatctaaaggcaaaagaggtgacccaactcctgtgcttggtatacacggt
cgaaaagggcctcccggagatccaggattaccaggaccctgtggattcccaggagagaag
ggttcaccaggtatccaagggcaacctggaagatcaggatccaagggtgaccctggatac
ccaggaataccaggacttccaggagctacaggtcctcagggattgccaggagaacctgga
gaaaaagggaaacatggaattttgggacctacaggattgcaaggattagctggatcccaa
ggcagaaaaggtcttcctggactgcccggactggatggcttggatggactaaaaggtcaa
aaaggttcttcaggagctccaggtcaaagcgaaacagggcccccaggatactcaggggaa
cttggaccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccc
cctggagaaaggggattcccaggattcccaggtagaagaggacctgttggacccactgga
cctatgggaagatcacctgacagtgcttctcctggtcctccaggtgatcaaggaccacct
ggtttagatggcatcagaggtcagcctgggaatcctggtccacctggagagactgtcttt
gtgcaaggagatccaggtgatatcggtattcaaggggcacctggtaatcctgggcagcga
gggcaacaaggaggcagaggtcttccagggagccaaggaagaagaggcttaaagggtcct
atgggaatccatggcccacagggtccacctggtgctataggacaaccaggagaccaaggt
tttcaagggaaacctggtcccagaggtcccacaggtactcatgaacctgttgctcattgt
gaccctggtgaaccaggaaaaatagatgattcatgccctgcaatcccagggcctcctggg
gaagcagggcaaagaggagatgatggctctgtaggattaccaggggcaataggccaccct
ggaccccaaggaagaaaaggtgaagaagggtcatgtggcctgccgggtcaagatggctta
ccaggggcacccgggccaccaggtgaccaagggaatataggagagcaagggtacgctggg
ccacaaggcccacctggccagactggtatcccaggaccaccaggctcccatattagatct
gcaagtggattcttgctcgtccttcacagtcagtcagacagagaaccactctgtccacag
gggatgccaaaattatggactggctacagtctgctgtacctggaaggacaagagaaagct
cataatcaagatcttggtctggcaggatcttgtcttcctgtgtttaataccatgcccttt
gcttactgtaacatcaaccaagtctgttactacgccagtcgaaacgataagtcttactgg
ttgtcaagcgctgctcctttaccaatgacgccgctctctgaagaagaaatacagccgtac
ataagcaggtgtgctgtatgtgaggccccagcccaagcagtagcagttcacagccaagat
cagtcgattcctccctgcccagtgaactggagaagtctgtggataggatattcctttctg
atgcacactggatctggtgatcaggggggtggacagtcccttatgtcacctggaagttgc
ctagaagacttcagatcagcaccattcattgaatgccagggtcagcggggaacatgtcaa
tttttcgccaatgaatacagtttctggctaacaaccgtgatgcctgagttgcagtttgca
tcagcccccttgtcaggaactcttaaagaaggacaagagcagaggaaaaaaatcagtaga
tgccaggtatgcctgaagcacagctaa
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integrated database retrieval system
