Balearica regulorum gibbericeps (East African grey crowned-crane): 104639661
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Entry
104639661 CDS
T09009
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
breg04131
]
104639661 (VPS13A)
Membrane trafficking [BR:
breg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104639661 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
Motif
Other DBs
NCBI-GeneID:
104639661
NCBI-ProteinID:
XP_010306100
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
DQVFVELELLIFLKLTWFFVTVFKMKSKSRSDLSELKVGQSTIEDIMSRAYDSFDIQLSS
IQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPKFKLSGQLPLLSI
QISDQKLTSILELIDSIPKPESAPATSSPPKITEAAISPVLSAPHLSQGVFPVLDLHSFA
ESESEEEFYDALSSPVEDMPFFEAPSGSLKRATSTRRKKLHKQESLKNMTEFQLTFEVAE
VLIKLCRLTGNTETPVLQLDIVGLGTELKLRTFDMTANAFLREVCLLCPEYMDDNDKPVY
IITTLDNIEDDLLTLEYIKADINGPELKTTYQNVLQKIKVNFSSLDVHLHTEALLNAMNY
LNNLLPKQETKVAEELVHEKIEEKKDVLKKLTSKKSKYEDVIDLNICADLSCLRIFIREK
KHRIAEIHIEGLDSQVIMKKAATEVTAKLKNIIIVDSDETALYKKALYITGKEVFNFRMI
SYVNATDGIAYTNMDVVDNRIYLTVGCIQVVFVNKFVSSILAFINNFQAAKEALTEATVQ
AAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSANVLVADLGLITVKNQFFIAKT
KARYNLPPVIDSMTVKLSELKLYRSCYEQGSLQTEVQLLQPLNLEVAVERNLAATWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGASTSLPEPKDTTSHCSDLHSTSQ
HSAGVTVVTSAVVELHSPMKIKTTLKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAE
FKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKKVMVDISY
KQGRDGTVLDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLKQSLPLKEQAPVQA
VSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQMRAC
PFLPEKRKGNITTVLQPCDFFFEMKQSGTNPQTADLTIKSLTIKVSPIIINTVITITSAL
YQTAETTEEEISQIPPDLWNKKDIKNLKMWFLEESSENEDTNPTAELVPTGESLKMSIES
VFLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSHLELEVHYFNEMFGVWEPLLEP
LEVEKSDLFKPWILEIKMKKKAKKALVESDAEEENYKVPEYKTVINVSSKDQLNITLSKC
GLQMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPITVLPSDSFSVLNVEFGEKKF
HLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQIYPHNHSTVEKIPLTKVGRCIYRV
RHEESGVERSIVCQIDTVEGSKMITIRSPVQIRNHFSIPLNIFEEGRCLGTASPENEFNI
PLSSYRSVLSLQPLPNENGVDGEYDMCEGITFDEIMKNVDSLLQRKCQSVRSTNHSLIIN
IVPVKDTLTSSLCAEDQWDFPYVVHLWPSVLLRNLLPYQITYSVEGNGNKYDTLQEGCSA
QIHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPDISFTTFYCITELDKTELDIAVHVT
YTTGQMVVAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQL
MVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRS
KYTLEVAEEGKEKWIPLVLQQ
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
gatcaagtatttgtagaattagagcttttaatatttttgaagttgacatggttttttgtg
actgtttttaagatgaaaagcaaaagtcgttctgatttatcagaactcaaagtaggacaa
agcactattgaagatataatgtcaagagcttatgacagttttgatatccagctcagcagt
atacagttactgtacagcaagcatgatgagaactggcaagaagctcggaagctgaaatac
tcatctcaacatatcttgcagcccttggatgtaaaggtggaatttagcagggctatggtt
gttacagatgcaagaatgcccaagttcaaactgtctggtcagctgcctttactttctatc
caaatatcagaccagaagctgacaagtatcttggagctaattgatagcattcctaagcct
gaaagtgctcctgctaccagttctcctccaaaaataactgaggctgcaatatcccctgtg
ctctcagcaccacatttatcacaaggtgtgtttcctgttttggatcttcattcatttgct
gagtcagagtcagaagaagaattttatgatgccctaagcagtcctgtggaagacatgcca
ttttttgaagctccatctggttccctcaagcgagctaccagtaccaggcgaaaaaaacta
cataaacaagagtctttgaaaaatatgacagaattccagctaacatttgaagtagctgag
gtcttaattaaattatgccgtcttactggtaataccgagacacctgtgctgcagcttgat
attgtagggttaggcactgaacttaaattaagaacatttgacatgactgcaaatgctttc
cttcgtgaagtttgtctgctgtgcccagagtatatggatgataatgacaagccagtttac
ataattactactttggataatatagaagatgatcttctcactctggagtacataaaggct
gatattaatggaccagaactgaaaactacctatcagaatgttctacagaaaataaaggtg
aacttttcatctctagatgttcatttgcatactgaagctctgctgaatgctatgaactat
ctgaacaatcttctacccaaacaagaaactaaagttgcagaagaactggtccatgaaaaa
atagaggagaagaaggatgttcttaagaaactaacatcaaaaaagtcgaagtatgaagac
gttattgacctcaatatctgtgcagatttatcctgtttacgtatctttattagagagaaa
aaacatagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaagaag
gcagcaacagaagtgactgcaaaattaaagaacatcattattgtggattccgatgagacg
gcattgtataaaaaggctctttacatcacaggaaaagaagtattcaactttagaatgata
tcttatgtgaatgctacagatggcattgcatatacaaatatggatgttgttgacaatcgt
atttacctgactgtgggatgtattcaagtagtttttgtcaacaagtttgtttcatctatt
ttggcttttataaataactttcaagctgccaaggaagctcttactgaggcaactgttcaa
gcagcagagaaagcagctacaggtgtaaaagagctagcggagcgtagttcccgtttggca
ctagatatcaatattaaagcgcctgttgtgatagttccacagtcagcaatgtctgcgaat
gtcctggtggctgatcttggtctaatcactgtgaagaatcaattctttatcgctaaaaca
aaagcacggtataatctcccgcctgtcattgactctatgaccgtgaaattgagtgaacta
aagttgtacagatcatgctatgagcagggttcattgcaaactgaagtacagttgctgcag
ccactcaatctggaagttgctgttgaacgaaacttagctgccacatggtataatgaagtt
cctgacattgaaatatctggtcgactcaagcctatgaatctaattctgagtcaggaggat
attaccacaatattgaggacactaaatgaaaatataggtggaagctctggtgcatcaaca
tctttaccagaaccaaaagatacgactagccattgtagtgatttgcatagtacttcacag
cactctgcaggtgtaactgttgtgacatcagctgtggtggaactgcattcacctatgaaa
ataaaaacaacactaaaactggacttcagatttgactctctgactttagtattgtatagt
ccaaattcaaaacaggttacaaatttggatcagagagatgaccttttgaagcttgcagag
tttaagttagttttgatgtcagctgctgtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagctggcaaattgtacattagatgataaaagacagtcaatccagaaggctaca
ccaagaatggtggaaatgaaacatggatttgaaaagaaagttatggtggatataagctat
aaacaggggagagatggcactgttcttgatgtgattgttcaagagatatacctttgtgca
agcatggagttcctacttactgttgcagatatattcctgaaggctaatgcagaaagtgct
gctgcacagagaaatctcaaacagtcattacctttaaaggagcaagcacctgtgcaggct
gtatctacaatggaaatgaacattgttgttaaaaatccagagattgtgtttgtggccgat
ttaacaagaagtgatgctcctgcattggtggttacaacacagtgcgaggtcttcattaaa
aatagccctgaaaggtatagcatgacagctgctgttaaagagatacaaatgagagcatgc
ccatttcttccagaaaaaaggaagggaaacattactacggtattacagccttgtgacttc
ttctttgaaatgaaacagtcaggtactaatccacagacagctgatctaacgattaaatct
ctaacaataaaagtttcaccaataatcattaacacagtaattactattacatcagccctt
tatcaaactgcagaaacaacagaagaagaaattagtcaaattcctccagacttgtggaat
aagaaagatataaaaaatctaaaaatgtggtttcttgaagagtcaagtgaaaatgaagat
acaaatccaactgctgaactggttcccacaggagagtcactgaaaatgagtatagaatct
gtttttctaacacttgaagctggggttgggcaccgaactgtaccaatgcttttagccaag
tcctcatttcttggagaagtcaaaaactggagtactctaatcaacctacgttctcatctt
gagctagaggtacactattttaacgagatgtttggggtgtgggaacctttgcttgaacca
ctagaagttgagaagagtgatttattcaaaccatggattcttgaaatcaagatgaagaag
aaggctaaaaaggcattggttgaatcagatgcagaagaagaaaactacaaagttccagaa
tataaaacagtaataaatgtttcctcaaaagaccagctgaacattactctatccaaatgt
gggctacaaatgttaagtaacttgggcacggcatttgctgaagcagctagtcaaacttca
gacatcttcaaaaaagaccgagcaccatttgtaataataaattctttaggacttcccatc
actgtcttgcctagtgattcctttagtgtccttaatgttgaatttggagaaaaaaaattt
catttaagagatggagagaatttaaatatggaatttgtcagaactaaaaatgagagtgac
cagttcacagcaatgacaactctgagtagcaagaggttttacattcagatatatcctcat
aaccattccactgtggaaaagattccattgacaaaagtgggtcgatgtatttacagagtg
agacatgaggaatccggtgttgaaaggtccattgtctgccaaattgatactgttgaagga
agcaagatgataactatacgttctcctgttcagataaggaatcatttttcaatcccatta
aatatttttgaggaaggaagatgtttagggactgcttcaccagaaaatgaattcaacata
ccattgtcctcttacagatccgtactgagtctgcaaccgctacccaatgaaaatggagtg
gatggagaatatgatatgtgtgaaggaattacatttgatgaaattatgaaaaacgttgac
agtttattacaaaggaaatgccagtctgtgaggtcaactaaccattcacttatcatcaat
attgttcctgtaaaagacacattaacatcttcattatgtgcagaagatcaatgggatttt
ccatatgttgttcatttatggccctctgttcttctccgcaatctccttccttatcaaata
acttactctgttgagggaaatgggaacaaatatgacactctacaagaagggtgttcagct
cagattcataatgcagtcttggatcaaacaaaactagatttacagttgcttaactatctt
gatcaaaactggaaaagtgaataccatataaaaagcaatctaccagacatcagcttcaca
acgttttactgtatcacagagttggataagactgaactggatattgctgtccacgtgacc
tatacaactgggcagatggttgtagcaattcacagtccatactggatggtaaataaaacc
ggtcgaatgttgcagtacaaagctgatggtattcaccgcaagcatcctccagattacaaa
aagccactccttttttctttccagcccaaaaacttcctccaaaataacaaggtgcaactt
atggtaactgacagtgaactgtctgatcagttttcactggacactgttggaagccatggg
tctgtgaaatgcaagagtcataaaaaggaatatcaagtcggtgtcaccataaacaacagc
agttttaatattactagaattgtaactttcactccgttttttatgatctcaaatagaagc
aaatacactttggaagtagctgaagaaggcaaggaaaagtggattcctcttgttttgcaa
cag
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