Balearica regulorum gibbericeps (East African grey crowned-crane): 104640680
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Entry
104640680 CDS
T09009
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104640680 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breg03400
]
104640680 (MSH6)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104640680 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PWWP
WPP
Autoind_bind
Motif
Other DBs
NCBI-GeneID:
104640680
NCBI-ProteinID:
XP_010307416
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEMEQMSESASG
NSDDCNSEEDVKSNKRVASRESAVKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEEASS
GVDENESTDTETDAESVAESPVKVPSKRKRREISKPAKRTSLENERSETPKRAVTVSLEA
KSKLTSFAAPESFESQASACNGGGISGFAAWEHEKLDWLQEGKKKDAHRRRQGDPDYDPC
TLYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKG
TWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREIC
RIITKGTQTYSVLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDD
RHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKV
LLEEGYFKEKQNSENGCCLPSVVKCLTSESDSLGLTPGENSELALSALGGCVFYLKKCLI
DQELLSLANFEEYVPVDIDTAKTTSSSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEG
TLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPHKMSEVSEHLKKLP
DLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVME
EIASDFKSKVLRQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPD
YDKALQDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVISRNLPEEYEL
KSTRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAV
LDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVI
GSKDEDGGSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTR
LGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELA
EKIQCRTLFSTHYHSLVEDYAHNAAVRLGHMACMVENESEDPSQETITFLYKFIEGACPK
SYGFNAARLANIPEEVIQKGHRKAREFEKTTLSLRVFRYLCLVVDGATSDANAVQKLTAM
LEHL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgcctcatatacaaccatccgactgaaagaacaata
gtcagaggaaaaggaaaatccactcgtgtccatgtacagttttttgatgacagccctaca
aggggctgggtcagtattaagtatctgaggccatataaaggttcatcagatggggagacg
ctgaagggaggtatgttttatagtacaaagcctgaaatcaaaagagcaatggttctagcg
gatgatgcaatgagtaaagataaaactaagcggctcgaactggcagtatgcagtgaacct
tcagacacagaggaggaggaagaggaggaaatggagcagatgagtgaaagtgcatcaggc
aacagtgatgactgcaatagtgaggaggatgtgaagagtaataagcgggtagcgagcagg
gaaagtgccgtaaaagcaaaaagaagaagagtgttggattctgacagtgatcacgatggc
tctgatgtagagttcaagcctgatgtgaaagaagcagcaagcagcgaggaagctagtagt
ggggtggatgaaaatgaatctactgacacagagacagatgcagagagtgttgcagaaagt
cctgtaaaagtcccctctaaacgaaagagaagagagataagcaagcctgctaaaaggact
agcttagaaaatgaacgttctgaaacgcccaaaagagcagtaacggtttctttagaagcc
aagtctaagctgacatcatttgcagcacctgaaagttttgagtctcaagcgagtgcttgc
aatggaggaggcatcagtggctttgcagcatgggaacatgaaaagctggattggctgcag
gaagggaaaaagaaagacgcgcacaggaggcggcagggtgaccctgattatgacccgtgt
actctgtatgtacctgaggactatctcaacaagtgtacgccaggaatgcggaggtggtgg
cagctgaaaagtcaaaactttgacgctgtgattttctacaaagttgggaaattctatgag
ttgtatcatatggatgcagtcactggcgtaaatgagttgggcctgatctttatgaaaggt
acttgggcccattctggttttccagaaactgcgtttggcagattctctgatgttctagtg
cagaaaggctacaaggtagcccgtgttgagcaaacagaaactcccgaaatgatggaaacg
cgttacaagtcaatggcccacccaacaaaatttgacaaggttgtacgcagagaaatatgc
agaatcatcaccaaaggcactcagacttacagcgtcctggactgtgatccctctgagaac
cataacaaataccttctgtgcgttaaggagaaagaagactcctctggacaacgtgtctat
ggggtctgctttgttgacacatcggtggggaagttttatgtaggccagttctcagatgac
cggcattgttcgaggtttaggactttagtagcgcattacactcctgtgcaggtactgtat
gaaaaggggaacctgtctgtggacacacagaagatactgaaaggctcgcttgtttcttgc
attcaggaagggctgatctctggttcccagttctggaacgcatctaaaacactaaaagtc
cttctcgaagaaggatatttcaaggagaaacagaactctgaaaatggatgttgtctgccc
tctgtagtcaaatgtctgacttcagagagtgactcactgggattaactcctggtgaaaac
agcgaattagctttgtcagctcttgggggatgtgtcttctatctcaaaaaatgtctgatt
gatcaggagctgttatcgctggcaaactttgaggagtatgtccctgtggatattgatact
gcaaaaactacaagttcaagtagtttctttgccaaaactgaccagcggatggtgctggat
ggagtcaccctgatgaacttggaagtcctgcagaatggaaccaatggaaccacggaaggt
actttgctggaaaggattgattcttgttgcacgccatttgggaagcgactcctgaaacag
tggctctgcgctccgctttgtaatcctaaatccatcaacgatcgtttggatgctgttgag
gaccttctggcagtaccacataaaatgtctgaagtcagcgagcacctcaagaaacttcct
gacctcgaaaggctgctcagcaaaattcacagtattggatcaccacttaaaagtcagaac
catcctgacagcagggccatcttttatgaagaaatcaaatacagcaaaaaaaaaattgct
gactttttgtctgcactggaggggtttaaagtaatgaatgaaattgttgatgtcatggaa
gaaatcgccagtgacttcaaatctaaagtccttaggcagctggtgacccgcaaagccaaa
aatccagatggccggttcccagacctgagtgcagagcttaaaagatgggatactgccttt
gatcataaccaggctcgaaagacaggagtgattactccgaaggcaggctttgaccccgac
tatgataaagcactacaggatattaaggctgttgaggaagatcttcacaagtacctggat
aagcaacgcaaactgcttggattcaaatccatgctgtactggggggcaggcaaaaaccga
taccaaatggaaataccagaaagtgtaatatcacgtaatttgcctgaggagtatgagttg
aagtcaacgaggaagggatataagcgctactggaccaaggagattgagaagatgctggcg
gcaatggttaatgctgaagagcgcagagatgcagcactaaaagactgtatgaggcgttta
ttttacaactttgataaaaatagcaaagactggcagacagctgtggaatgcattgctgtg
ttagatgttttgatgtcccttgctaactacagtcaagatggtgatggaccactgtgccga
cctgtaattctactgcctgtggatagtgcacctcccttcctggaacttaaaaactcacgt
catccatgcattacgaaaacgttctttggggatgatttcattcctaatgacattgtgata
ggcagcaaagatgaagatggcggtagtgaagcttcctgtgtgttagtaactggcccaaat
atgggtggcaaatctacgctcatgagacaggctggtctcctggttataatggctcaactg
ggatgctacgtacctgctgaagtctgcaggcttacaccgattgacagagtatttacaagg
ctgggtgcctcagacaggattatgtcaggtgaaagtaccttctttgttgaattgagtgag
acctccagcattctccagcatgcgacagagcattcccttgttcttgtggatgaactgggc
aggggcacagctacttttgatggaacggccatagcaagtgcagttgtgaaagaacttgca
gagaaaatccagtgtcgcactctgttctccacgcactaccattcgctggtggaggactac
gcgcacaacgcggctgtgcggcttgggcacatggcatgtatggttgaaaatgagagcgaa
gatccaagccaagaaacaattacgttcctgtataagttcattgaaggagcatgtccaaag
agttacggcttcaacgcagcaagacttgctaatattccagaggaagtgattcagaagggg
cacagaaaagcaagagagtttgaaaaaacaaccctttcactgcgagtatttaggtatctg
tgcctggtggtggatggcgcaacgagtgatgcgaatgctgttcagaaacttaccgctatg
ctcgagcatctgtaa
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