Balearica regulorum gibbericeps (East African grey crowned-crane): 104640956
Help
Entry
104640956 CDS
T09009
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
breg03009
]
104640956 (PDCD11)
Ribosome biogenesis [BR:
breg03009
]
Eukaryotic type
90S particles
Other 90S particles
104640956 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
OB_RRP5
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
ARM_TT21_5th
ARM_TT21
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
104640956
NCBI-ProteinID:
XP_010307786
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MASMEENFPRGGIQKKPTEGKTPNSKLERDNLFDVHHEEQSRKRKRSQKDQGNQKKFKAD
KIAAAKDSVVNIEPFTIEALCEGMLLLGCIKEVSEYELAISLPNGLSGFVPVTQISDAYS
KMLSKEVAQGELLEDLNSLLDMYSPGTLVRCIVTSVEKRADGRRSIKLSIDPKKVNKGLN
TSSLALGMLLSGSVSSVEDHGYLIDIGVSGTHAFLPRQKAQNYIKALKRGPDLKIGQNLN
CIIVEVKNEGRVVRLSVDRSEVAASLATERQNWTLSNLLPGLVVKARVQKVAPLGMKLSF
LSSFTGIVDFMHMDPEKSMNYSPDQVMKACILSIHPTSKVVRLTLRQAFLQPGGSPNQLS
SDRMGAVVEESTVKAFYKQFGAIFELDDGTLAFARLKHLSKNRKSLKPVAFKAGCKHKCR
IIDYSLMDEMCIVSLKYQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVADGIKGLV
PLMHLADVTLKQPEKKYNIGDEVRCRVLECNPEGRKLILTLKKSLVQSKLPVLSNYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSAEPISCPDKVFHEGQVVKVMVLKCE
PQQERLLLSFRLSSKSAPEDKKECSLKKKQEVKYQIGEMVDVKVLKKKDNGLEVSILEDE
GNVIASIPTVHLSDFVATCKLLWHCLQEGDVLPRVMCLSDKGEHIILSRKSAVISAVQEE
QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFEVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRNLLRRRGEPSM
ARGLCELVPGKELQLVVQDMKEDGSALFSGXXXXXXXXXXXGRVCAAVVPAPATRYHLGD
KNLVPGEKTKALVLHVDALTSKVYVSLREELLKQRAKQLTENSQHSAIVQHIAEDFAIVS
LLETGQLAAIPIASHFNDTFRFDSEKLKVGQIISATLKAVKVNDHGVLLAVQGPAKKNVF
ARVRNESETAVEEMLAAVKHSLSLGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDE
VPIGSFPTYTLKAGQKVTARVIGGREVNTHRYLPITHPHFTRSIPELSIRPSEIEGKVTA
MLNLKEDGPLKKPGLYNVGQTITCFVKKYNILKNWLEVEVAPDIRGRVPHLLLSLNTKVL
KHPEKSFKNGQAISATVTGTDVTETNLCLSLTGIQSLEQGTITVGMVTKVTPHIGLTIAL
PGGKTGKVSIFHLNDTYTENPLGDFKVGKIVRCYILSSENGKIQLSLRQSRLNPKSNSKV
EDVEITCIKDVKKGQLVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKY
LPEGKLLTAKVLSVNGKEKHVELSLLPKDTGMPSVLPESLGLPRYDREEEKTEADDSEKR
EELKLKTKRRRGNSESEQEAKPKKRKMTMTADEYDSGIEVYYREKEDDDQEEEAAKKKSK
VRKPGEAPRLQVSMGFTWDEDMNAMDIPVLNQKEESSESEEEEDPQSKVKKQTKKEKELE
KQKKEKELCKLEAALMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARA
VAERALKTICFREEQEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDI
YANSEKYKQAEELYQTMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEH
VDVISRFAQLEFRFGDPEHAKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFER
VIHLSLAPKKMKFFFKRYLDYEKKFGTTESVLAVKRAALEYVETKSSLADT
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga
aaaacacccaactcaaagttagagcgggacaatttgtttgatgttcaccatgaagaacaa
tcccggaaaagaaaaaggagccaaaaggatcaaggaaatcagaaaaagttcaaggcagac
aaaatagctgctgctaaagacagtgttgtgaatattgaaccattcacgattgaggcgctc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgaatatgagctagccatc
agcttgcccaatggactttcaggatttgtgccagtcacacagatcagcgatgcctacagc
aaaatgctgagcaaggaggtggcccaaggagaactcctggaggacttgaattcgctcttg
gacatgtattctccagggacactggtcaggtgcattgtgaccagtgttgagaaaagggct
gatggacgtcggagtatcaaattatcgattgaccccaagaaggtcaataagggtctgaac
acttcatcgctagcattgggcatgctgctctctggctctgtgtctagtgtggaagaccat
ggctacctcattgatattggagtcagtgggactcatgctttcctgcctcgtcagaaagcc
caaaattacattaaagcgctcaagagagggcctgacttgaaaataggccagaatctgaac
tgtatcattgtggaagtaaagaacgagggaagagtggtccgtttgtctgttgatcgatca
gaggttgctgcatccctcgcaacagagcgacagaactggacgctgtctaatttattgcca
gggctggtggtgaaagctcgtgtgcagaaggtggccccacttgggatgaaactgagcttt
ttgtcttccttcactggcattgtggatttcatgcacatggacccagagaaatccatgaac
tattctccagatcaagtgatgaaggcttgcatcctctctatccaccccacctccaaggtg
gtgcgccttactctacggcaggccttcctccagcctgggggatccccaaaccagctctcc
agtgatcgcatgggggcagtggtggaggagtcgacagtaaaagctttctacaagcagttt
ggtgccatctttgaacttgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaacagaaaatccttgaaacctgtggcatttaaggcaggatgcaaacataaatgtcgg
atcattgactacagcctgatggacgagatgtgtattgtgtctctgaagtatcagattatt
gaagcccggtttctgcaataccaggatatccacacaggagatgtggtgcagggcaaagtg
tttgctctgaaacccattgggatgcaggtgaaagtggctgatgggattaaagggcttgtg
ccgttgatgcatcttgctgatgtgaccctgaagcagcctgagaagaagtacaacatagga
gatgaagtcaggtgtcgggtgctagagtgcaatcctgaaggaaggaagttgatccttact
ctaaagaaaagtcttgtccaatcaaaacttccagtcctctccaattatgaagatgcaaaa
ccaggactgatcacacatggctttgtggtctgtgcaagggagtttggctgcatcgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagtgcagaacccatatct
tgtccagataaagtcttccatgaaggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttgttgtcatttaggttatcaagcaagtctgccccggaggac
aaaaaggagtgttctctgaagaagaaacaggaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttgaagaagaaagataatgggctagaggtttctatcttagaagatgaa
ggcaatgtgatagcctcgattcccacagtgcacctctctgactttgttgctacctgcaag
ctcctgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgac
aagggagagcatattatcttgagcagaaagtctgcagtgatttctgctgtacaggaggag
caagttgtgagaagtttctctgaaatccagcctgggatgctgttgacaggttacgttagg
aatgtgatgccatttggagtgttcgtggagttcccgtttggtgtgacaggactggctccc
aaagtgagcatgagtgacaagtttgtgacggacaccaaggaccactttgaggtgggacag
actgtgattgcgaaggtgatgagcattgatgaagagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttgccctgctgaatcag
tatttcaaggagatgaaagaaatcaggaacttgttgagaagaagaggggagcccagcatg
gcccgaggcctttgtgagttggtgcctgggaaggagctgcagctggtcgtgcaggacatg
aaggaggatggctcagcactgttcagtggcagnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnngggcgcgtgtgtgccgcggttgtccctgcaccagccactcgctaccatctgggagac
aaaaatcttgttcctggtgagaaaaccaaggcattggttcttcatgtggatgccctcaca
tccaaggtgtatgtttctcttcgggaagaactgttaaaacaaagagccaagcaactcaca
gagaattcccagcactctgccatcgtgcagcacatagcagaagattttgccatcgtgtct
ttgttggaaacaggccagctggcagctatcccaatagcgtctcacttcaatgacaccttc
cgctttgactcagaaaaactgaaggtgggacaaataatctccgcaaccttgaaagcggtg
aaagtgaatgaccatggagtcttgttagcggtacaaggcccagcaaagaagaatgttttt
gcaagggtccggaacgaatctgagacagcagtagaagagatgcttgctgctgtgaaacac
tcgctttccctgggggatgttgttactggtactgttaaatccgtcaaaccaacccatgtc
acagttgctattgatgacaagctaacaggttcaatccatgcatcccggattctggatgaa
gtgcccataggctcttttccaacatatactctgaaagctggacagaaggtgactgcccga
gtcattggaggcagagaagtgaatactcacaggtacctacctatcacccatccacacttc
acacggtccattccagagctcagcattcgaccaagcgaaatagaagggaaagtcacagca
atgctgaatcttaaagaagacggtcccctcaagaaacctggactctacaatgttggacag
accatcacctgttttgtgaaaaagtataacatcctcaaaaattggctggaggtagaagtt
gcccctgacattcgaggaagagttcctcatctgctgctgtctttgaacaccaaggtctta
aaacatccagaaaagagcttcaaaaatggccaggcaatatcagctacagtgactggaaca
gatgtcaccgaaacaaacctctgcttgtcactcacaggaattcagtcactggagcagggc
accatcactgtaggcatggtaacaaaggtgactccacacattggtttgaccattgcgctg
ccaggtgggaagactggcaaagtcagcatctttcatctgaatgatacttacacggagaat
cctctgggtgacttcaaagttggcaagattgtcaggtgttacatcctctccagcgagaac
ggcaaaatccagttatctctccggcaatcccgactaaacccaaagagcaacagcaaagtg
gaggatgttgaaataacatgtattaaggatgttaaaaaaggccagctagtgagaggctat
gtcaaatcaatcactccatcaggtgtattctttggcttgtccacttcacttctgggccga
atcctgttccagaacgtttccccttactttgtacagaaacactccttatatgaaaagtac
ctgcctgaaggaaagctgcttactgccaaggtgcttagtgtaaatggaaaagaaaaacat
gttgaactttctctcctgcccaaggacaccgggatgccaagtgtcttgcctgaatcccta
ggcctaccacgatatgatagagaggaagagaaaacagaggcagatgatagtgaaaagaga
gaagagcttaagctgaagacaaaacggagaagaggaaactctgaaagtgaacaggaggcg
aagccaaaaaaaaggaagatgactatgacagcagatgagtatgacagtggaattgaggta
tattaccgggagaaggaggatgacgaccaggaggaagaggcagctaaaaagaaatctaag
gtaaggaaacctggtgaagctcccaggctgcaggtttccatgggcttcacctgggatgag
gacatgaatgcaatggatatacctgtgctgaatcagaaggaagagagctcagagagcgag
gaggaggaagatccacagtcgaaggtgaagaaacaaacaaagaaggagaaggagctagag
aagcagaagaaggagaaggaactctgcaaattagaggcagctctgatggaccccagtcga
cagccccagtcagcagatgactttgaccgcctggtgctgagcagtcccaacagctccatc
ctctggctacagtacatggctttccacctccaggctaccgagattgagaaggccagagct
gtggcagagcgagcgcttaaaacaatctgcttcagggaagaacaggagaagctgaatgtc
tgggtagctctgctgaacttggagaacatgtatggaactgaggagacactgatgaaggtc
tttgagagagctgttcaatacaatgaacctctgaaagtcttccagcatttgtgtgacatc
tatgccaattctgagaagtacaagcaagcagaagaattgtaccagacaatgctgaagcgt
ttccgtcaggagaaatctgtgtggctgaaatacgcctctttcctcctgaagcaaggccag
actgaggctacacacaggcttttggagcgtgctctcaaggctttgcccaccaaagaacat
gtggatgtcatttcaaggtttgcacagctggagttccgttttggggacccagaacatgcc
aaggccctctttgagagcaccctcagcagctatcccaagcggacagacatctggtcaatc
tacatggacatcatgatcaaacatggcagccagaaggaagtacgcgacatctttgagagg
gtcatacacctgagcttggcaccaaagaagatgaaattcttctttaaacgctacctggat
tatgagaagaaatttggtacaacagaaagtgtcctggctgttaaaagagcagcacttgag
tatgtggagaccaagagttcccttgctgacacctaa
DBGET
integrated database retrieval system
