Balearica regulorum gibbericeps (East African grey crowned-crane): 104642159
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Entry
104642159 CDS
T09009
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03420
Nucleotide excision repair
breg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104642159 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
104642159 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
breg04121
]
104642159 (DDB1)
03400 DNA repair and recombination proteins [BR:
breg03400
]
104642159 (DDB1)
Ubiquitin system [BR:
breg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104642159 (DDB1)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104642159 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104642159 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
104642159
NCBI-ProteinID:
XP_010309346
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILT
AKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFK
VIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKE
FNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCH
NRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGV
VFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGA
FKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRETDNTLVLSFVGQTRVLMLNGE
EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVA
SCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSPLCAIGLW
TDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETG
LLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCP
LNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIE
VQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEV
LHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSL
AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFI
LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS
AATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT
SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS
RPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3362 nt
NT seq
+upstream
nt +downstream
nt
ggcacttcacctcagcagaggatctgaacctgttgatcgccaaaaacacacgactggaga
tctacgtggtgacagcggaggggctgcggcccgtcaaggaggtggggatgtacggcaaga
ccgccgtcatggagctcttccgccccaagggggagagcaaggatttgttgttcatcctga
cagccaagtacaacgcctgtatcctcgagtacaaacagaacggggacagcattgatatta
taacccgtgcccacggcaacgtgcaggatcgcatcggccgtccctcagagaccggcataa
ttggcatcattgacccagagtgccggatgatcggcctgcggctatacgacggcctcttca
aggtcattcccctggaccgggagaacaaggagttaaaggcttttaacatccgcctggaag
agctccaagtcatcgatgtgaagtttctctacggctgtcaagctccaaccatctgctttg
tctaccaggaccctcagggtcgtcacgtcaagacgtacgaggtgtccctgcgtgagaagg
agtttaacaaaggtccttggaaacaggagaacgtagaggctgaagcctccatggtcatcg
cagtgccagagccttttggaggcgcgatcatcatcgggcaggagtctatcacctatcaca
acggagataaatacctagctatagccccacctatcatcaagcaaagtacgattgtgtgcc
acaaccgcgtggatcccaacgggtcccgttacttgctgggggacatggaaggacgacttt
tcatgctgctcctggagaaggaggaacagatggatggcactgtcaccttgaaggacctgc
gcgtggaactgctcggcgagacatccattgcagagtgcttgacctacctggacaatggag
ttgtatttgtcggttctcggcttggggattcccagcttgtgaagctcaacgtggacagca
acgagcagggctcctacgtagtggctatggagaccttcaccaaccttggtcccatcgttg
acatgtgtgtggtggacctggaaagacaaggccaagggcagctcgtcacatgctcgggtg
cgtttaaagagggttcactgcggatcatccggaatggcattggaattcacgagcacgcca
gcattgacttgccggggattaaaggcttgtggcccctgaggtcggactctcatcgtgaaa
cggacaatacgttggtgctgtcctttgtcggccagaccagggttcttatgttaaatggag
aggaagtagaagagacggagctcacagggtttgtggatgatcagcagactttcttctgtg
gcaacgtggcacatcagcagttgatccagatcacctctgcctctgtgagactggttagtc
aggagcccaaagccctggtgagcgagtggaaagagcccaatggaaagaacatcagcgtgg
cttcctgtaacagtaaccaggtagtggtggccgtgggacgagccctgtattacctggaga
tccgaccccaggagctcaggcagatcagctgcacagaaatggagcatgaagttgcttgcc
tggacatcactcctttgggggacaccaacggcatgtccccactgtgtgcaatcgggctct
ggactgacatctctgcccgcatcctcaagctgccttcgtttgaactgctgcacaaagaga
tgctgggaggagaaattatccctcgctccatcctgatgacgaccttcgagagcagccatt
accttctctgcgccctgggggacggagctctcttctacttcgggctcagcctcgagactg
gtttgctgagcgaccggaagaaggtgacccttgggacccagcccaccgtcctgaggactt
tccgctctctgtccaccaccaatgtgtttgcctgctctgaccgccccaccgtcatctaca
gcagtaaccacaaactggtcttctccaacgtcaacctgaaggaggtgaactacatgtgtc
cccttaactcggatgggtaccccgacagcttggcgttggccaataacagcaccttgacca
tcggcaccattgacgagatccagaagctgcacatccgcacggttcccctctatgaatcgc
ccaggaagatctgctaccaggaggtatcacagtgtttcggggtgctctcaagtcggatcg
aggtgcaggatgccagtgggggcaccactgcgctcagacccagcgccagcacccaggctc
tgtccagcagcgtgagcaccagcaagctgttctccagcagcacggcaccgcatgagacat
ccttcggagaagaggtggaggtgcacaacctgctcatcatagatcagcacaccttcgaag
tgcttcacgctcaccagtttctgcagaacgagtacgccctcagcctggtctcctgcaagc
ttggcaaggatccgaacacctacttcatcgtgggcaccgccatggtgtatcccgaggagg
cagagcccaaacagggacgcattgtcgtcttccactactctgacgggaagctgcagagcc
tggctgagaaggaggtgaagggcgctgtgtattccatggtggagttcaatgggaagctgt
tagccagcatcaacagcacggtgcgcctgtacgagtggacagctgagaaagagctgcgca
cagagtgcaaccattacaacaacatcatggcgctctacctgaagaccaagggagacttca
tccttgtgggagatctgatgcggtccgtcctcctccttgcgtacaagcctatggaaggaa
acttcgaggagattgcccgggacttcaatccaaactggatgagtgccgtggagatcctgg
acgacgacaacttcttgggagcagagaatgctttcaatttgtttgtgtgccagaaggaca
gcgcggccacgaccgatgaggagcgccagcatttgcaggaggtgggactgtcccacctgg
gagagttcgtcaatgttttctgtcacgggtctctggtcatgcagaacctgggtgagacat
ccacgccaacacagggctcggttctcttcggcacagtcaacggcatgatcggactagtga
cctcactgtcggagagctggtacaacctcctgctggacatgcagaacaggctgaataaag
tcatcaagagcgtgggcaagattgagcactccttctggagatcgtttcacaccgaacgca
agacagaaccggctacgggcttcattgacggtgacctgatcgaaagcttcctggacatca
gcagacccaagatgcaggaggtggtggcaaacttgcagatcgatgacggcagcggcatga
agagggaagccaccgtagacgacctgataaagatcgtggaggagctgacccggatccatt
ag
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integrated database retrieval system
