Balearica regulorum gibbericeps (East African grey crowned-crane): 104642197
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Entry
104642197 CDS
T09009
Symbol
PMS1
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breg03400
]
104642197 (PMS1)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104642197 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box_2
HMG_box
HMG_box_5
IL5
Motif
Other DBs
NCBI-GeneID:
104642197
NCBI-ProteinID:
XP_010309397
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MKQLSAETIRLLSSSQVITSIASVVKELIENSLDASATNIDIKLENYGFNKLEVRDNGNG
IKVTDVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLVTTKTADDDFSTQ
YTLDSNGHVISKKPSHLGQGTTVTVLKLFQNLPVRKQFYSTNRKCKEELRKVQDLLIAYG
IIKPDLRITLTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSGFL
PKAESNSSLTSLSSAERSFIFINNRPVHQKEILKLIRQYYSLVTHKDCTRLYPIFFLNIT
VPASAVDVNLTPDKTQVLLHYKESVLLAVENVLKSLYGPLPATVPGESNKTDVTSEDMFV
YRTEQTDVVVNEMRPSGNDDLHAHTSFLSFSSDVQNCQAGKNTEICLNHQTFCGDNVHSC
LDKKEVSKSDAFPDSSLNLLCEKEQNGQNMTDIQSNSVPVDPKSKKADEHLLSSDNIDEV
EKNEEALVPKDLPEISADNWSMGSGFKNSLGGNLEPVKILIPEAGGKINKQNEHTGEQSN
DPQVSNQSIKKRNVISEKFGHVTAYDLISSRIIKKPKSAIGFFTEECRPKLIADNPKSSM
XXXXXXXXXXXLKIEEQWKNLNEEEKKNYELKAAKDLERYDREVKKAMGQAAHQPTKEAE
KKKPKLKNSPPGQQKLDKILHVQIEKKWKPQEPAKIVTVPFSLSSCRRHLQRREKNYSDE
HELFQIHRQSFPDVWIFATEKKLMLLNPYRLEEALLHKRLLMNHKLPVERLDKPIVLTDS
VLGGSQYMAALHKMEKDYQSFSGSGYLTDPRLVANGFQIKVIEGASATESYLEIEGMANC
LPYYGTSDLKEILNAVVNGNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNTI
YRMKQQLGKENKGCVHGRPFFHHLTDIPEVDKHNSMEIIQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgtcggcagaaactattcgtctcctttcaagttctcaggtgattacatca
attgccagcgtggtgaaggagctgatagaaaattccttggatgccagtgccacaaatatc
gatattaaattggagaattacgggtttaacaaactagaagtaagagacaatgggaatgga
atcaaggttactgatgttccagttatggcaatcaaacactacacctcaaaaataagctct
tctgaggaccttgaaaggttgacaacatacggtttccgtggggaggctttgggatcaatt
tgctgcatatcagaggttttggtcacaacgaagacagctgatgatgatttcagcactcag
tatactttggatagcaatgggcatgtaatttctaaaaagccttcccatcttgggcaaggt
actacagtaacagtcctaaagttgtttcagaatcttcctgtaagaaagcagttttactca
acaaatagaaaatgtaaggaagaactgagaaaagtccaagatctactgatagcatatggt
atcataaaaccagacctgaggataaccttaacacataataaggcagttatttggcagaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctgtgaagatcctgagataaatctttctggatttctc
ccaaaagctgaatcaaacagttctttgacaagcctttcaagtgcagaaaggagtttcatt
tttataaataatcgtccggttcatcagaaggaaatactgaagttaattcgacagtactac
agtctggtgacacacaaggactgtactcgtttatatcctattttcttcttgaatattact
gtacctgcctctgctgtggatgtgaatttaacacctgataaaactcaagttttactgcat
tacaaggaatctgtcttacttgctgttgaaaatgtgttgaaatcactgtatgggccacta
cctgctacagtccctggtgaaagtaataaaacagatgttacctcagaagacatgtttgtt
tatagaacagaacaaacagatgtggttgttaatgaaatgagaccatctggaaacgatgat
ctacatgctcatacttcattcctttcattcagcagtgatgtgcaaaactgtcaagcagga
aaaaacacagagatctgcttaaatcatcagacgttttgtggtgataatgtacatagttgc
ctggacaaaaaagaggtttctaagagtgatgcctttccagacagttccttaaatttattg
tgtgagaaggagcagaatgggcagaatatgactgatattcaaagtaacagtgttcctgtg
gaccccaagtctaaaaaagctgatgagcatcttttgagttctgataatattgacgaagta
gaaaaaaatgaggaagccttagtccctaaagacttacctgaaatctctgctgataattgg
agtatgggaagtggatttaaaaatagtctaggaggcaacctggaacctgttaagattttg
attcctgaagctggaggaaaaattaataagcaaaatgaacatactggtgaacaaagcaac
gatccacaagtctcaaatcaaagcataaagaaaagaaatgtgataagtgaaaaatttgga
catgtgacagcttatgacttaattagtagtagaataataaagaaaccaaagtctgcaatt
ggatttttcactgaggaatgtcgtccaaaattgatagctgataatccaaagtccagcatg
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgctgaaaattgaagagcagtggaagaat
ttgaatgaagaggaaaaaaagaattatgaactaaaagctgctaaagacctggaacggtat
gacagagaggtcaagaaagctatgggacaggcagcgcaccaaccaacgaaggaggcagaa
aaaaagaaacccaagctcaagaattccccgcctggccagcagaagcttgacaagatactt
catgttcaaattgaaaagaagtggaaacctcaagagcctgcgaaaattgtgacagtgcct
ttttctctgagttcctgtagacgccaccttcagagacgtgagaaaaattattcagatgaa
catgagcttttccagatccatcgtcagagttttcctgatgtctggatatttgctactgaa
aaaaagttaatgttgctgaatccatatagattggaagaagccctgctccataaaagatta
ctgatgaatcataagcttccagtagagagactggacaagccaattgtgttaacagacagt
gttcttggtggatctcagtatatggctgctctccataaaatggagaaggattaccagagt
ttcagtggatcgggttatttgacagacccaaggcttgtagcaaatggattccagataaaa
gtgatagaaggtgcttcagctacagaaagttatctggaaatagaagggatggcaaattgt
ctgccatattatggtacttctgatttgaaagaaattctgaatgcagtagttaatggaaat
gcaaaggaagtatatgaatgtaggcctctcaaagtgataaattacttggagggagaagca
gtacgtttagctcggcagctgcccttacatttgtcaaaagaggatgtacaaaacacaatt
tacaggatgaagcaacagcttggaaaggaaaataaaggctgtgttcatggtcgtcctttt
tttcatcacttaacagatattccagaagttgacaagcacaactccatggaaattattcag
taa
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