Balearica regulorum gibbericeps (East African grey crowned-crane): 104642840
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Entry
104642840 CDS
T09009
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1
KO
K11757
protein polybromo-1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104642840 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breg03021
]
104642840 (PBRM1)
03036 Chromosome and associated proteins [BR:
breg03036
]
104642840 (PBRM1)
Transcription machinery [BR:
breg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104642840 (PBRM1)
Chromosome and associated proteins [BR:
breg03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
104642840 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
DUF7877
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104642840
NCBI-ProteinID:
XP_010310264
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEED
EDEEGHDNQGANSELSSPGYLKEILEQLLEAVVVATNPSGHLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTTSKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPFYQLYDTVRSCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKAPISLQQIRTKLKNHEYETLDQLEADLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIR
KQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK
YAGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLXXXXXXXXXXXMPAV
DPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQ
FFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEK
SEDSSGSAGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPEN
FRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKVDEE
KHTETLEDSKAGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSH
GLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCI
LGKCAVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIY
YFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTETPSMPQLQTPL
ASELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGEL
SRLVGTEWRNLEATKKAEYE
NT seq
4381 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagctacctctccatccagcagcgtcagtggaggagactttgatgac
ggccaccactccacgaatataccaggcccaagcagaaagaggaggagactttccaatctc
ccaactgtagatcctattgctgtatgccatgaactttacaacaccatcagagattacaaa
gatgaacagggcaggctcctttgtgagcttttcattagggcaccgaagcgaagaaatcag
ccagattattatgaagtggtttctcagccaatcgatttaatgaaaatccaacaaaagcta
aagatggaggaatacgatgatgtgaatgtgctgactgctgattttcagcttctcttcaac
aacgcgaaggcttactataagcccgattctcctgaatataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggaggaagat
gaagatgaggaaggacatgacaatcaaggcgcaaattctgaattatcatctccaggttac
ctgaaggaaattcttgaacagcttcttgaagctgtagttgttgctacaaacccgtcagga
cacctcataagtgaactgtttcagaagcttccttctaaagtgcaatatccagattattat
gcaataataaaggagcctatagatcttaaaactattgcccaaaggatacagaatggaacc
tataaaagcattcatgcaatggccaaggatatagatcttctggcaaagaatgccaaaacc
tacaatgagcctggatcacaagtattcaaggatgcaaatgcgattaaaaaaatatttaat
atgaaaaaagctgaaattgaacacagtgagttggccaagtcaagtctccgaatcaggact
ccatcaaatttgactacttccaagctgacaggtccttcctcacaaggtaaaggcagtgtt
ggtgatgagagaaattcttctaacaaatattatcgcaacaaaagatcagcccaaggggat
cgtttatcagcaataaccatggcattacagtatggatcagaaagtgatgaggatgcagct
ttggctgctgctgctcgttatgaagaaggagaatctgaagccgagagcattacttctttc
atggacacttctaatcctttttatcagctttatgacacagttagaagttgccgaaataat
cagggccagctcatatctgaacccttcttccacttgccatccaagaaaaagtatcctgat
tattatcagcaaattaaagcacctatttcattgcagcagatcagaaccaaactgaagaac
catgagtatgaaactttggatcagttggaggccgatctgaacttgatgtttgaaaatgcc
aagcgctacaacgttcccaattctgccatctataagagagtactgaaaatgcagcaggtc
atgcaggcaaagaagaaggagcttgctaggagagatgacattgaggatggggacagtatg
atttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaatatacga
aagcaacgaatgaagatcttatacaatgcagttctggaagctcgagaaccgggcacaggc
agacggctctgtgatctgtttatggttaagccatccaaaaaggactatccagactattat
aaaattatcttggagcccatggacttgaaaatgatagaacacaacatccgcaatgataag
tacgcaggggaagaagctatgattgaagacatgaagctcatgttccgaaatgcaaggcat
tataatgaggaaggctcccaggtatacaatgatgcccatatgctggaaaagatccttaaa
gaaaaaaggaaagaactgggacctctagctgaagatgatgatgttgcatcccctaaacta
aagctaagtagaaaaagtggcatttctcctaaaaaatcgaaatacatgactccaatgcaa
cagaagttgaatgaggtgtatgaagcagttaagaattacacggataaacgaggcaggcga
ctgagcgccatcttcttgaggctgccatctcggtctgaacttcctgactattatgttacc
attaaaaagcccgttgacatggaaaagatcagaagtcatatgatggcaaataaataccag
gatattgattccatggtagaggactttgtcatgatgttcaataatgcttgcacatataac
gagccagaatctttgatttataaagatgccctggtcctgcataaagttttgcttgaaact
cggagagaaatagaaggagatgaggattctcatgtgcccaatgtcaccttgctaattcag
gaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggcagatgc
tacagtgactccttagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgcctgctgtt
gatcccaatttcccaaataaacctcctctgacttttgatattatccgaaaaaacgttgaa
aataatcgctatagaagattggacttgtttcaggagaatatgtttgaggtactggagagg
gcaaggagaatgaacaggactgattcagagatttacgaggatgcggttgaacttcagcag
ttctttattaaaattcgagatgagctttgtaagaatggagagattcttttgtcacctgct
ctcagctataccaccaagcatcttcacaatgatgtagaaaaggaaaagaaggaaaagctg
cccaaagaaatagaggaggataagctcaaaagagaggaggagaagagagaagctgaaaag
agtgaagattcttctggatcagctgggctgtcgagcttgcatcggacctacagccaggat
tgcagcttcaagaacagcatgtaccacgtaggagattatgtgtatgtggagcctgctgaa
gccaacttgcaacctcacatagtctgcattgagaggctgtgggaagattcagctggagag
aaatggctctacggctgttggttttatcgcccaaatgaaacatttcatcttgcaacacga
aaattcttggagaaagaagtttttaaaagtgactattacaataaagttcctgttagcaaa
attttaggcaaatgtgtggtcatgtttgtcaaggaatattttaaattgtgtcctgaaaac
ttcagagatgaggatgtctatgtctgtgagtcacgttattcagcaaagacaaaatctttt
aaaaagattaaactgtggactatgcctgtaagctctgtaagatttgtcccacgagatgta
cccctgcctgtggtccgtgttgcttctgtatttgctaatacagacaaagtagatgaggag
aaacacacagaaacattggaggacagtaaggcgggagaaagcatccttcatcttgaaaag
gacaaagaagatgttccagtagaaatgtctaatggagaacctggttgccattacttcgaa
cagctctgctacaatgatatgtggcttaaggttggggactgtgtctttataaaatcccat
gggctggtgcgacctcgggttggaagaattgaaaagatgtgggtgcgagatggagctgca
tatttctttggtccaatctttatacatcctgaagaaactgaacatgaaccaactaaaatg
ttctacaagaaggaagtgtttttgagtaacttggaggagacctgtccaatgacttgcatt
ttgggaaagtgtgcggttctgtccttcaaagacttcctctcctgcagaccaacagaaatc
tctgaaaacgatgtttttctttgtgagagccgctacaatgaaagtgacaaacaaatgaag
aaatttaaagggctgaagaggttttcactctctgcaaaagttgtagatgatgaaatatat
tattttagaaaacccatcgttcctcagaaggaaccatctccgctactggaaaagaagatt
cagcagctggaagcgaaatttgctgagttggaaggaggtgatgaggacatggaagagatg
ggagaagaggaaggtgatatgactgaaacaccttctatgcctcagcttcagaccccgtta
gctagtgaattggatataatgccttatactccaccacagtccactcccaagtctgttaag
ggcagcaccaagaaggagggatcaaaaaggaagatcaacatgagtgggtacatcttattt
agcagcgagatgagagctgtgattaaagctcagcacccagactactcctttggagagctc
agcaggcttgtaggaactgaatggaggaacttggaagcaacaaagaaagcagagtatgaa
g
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