Balearica regulorum gibbericeps (East African grey crowned-crane): 104643307
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Entry
104643307 CDS
T09009
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg02010
ABC transporters
breg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104643307 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104643307 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
breg02000
]
104643307 (ABCA1)
Transporters [BR:
breg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104643307 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104643307
NCBI-ProteinID:
XP_010310883
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
LKLRDFLVDNETFSDFLHHNVSMPSSAVEELLGAEVNLQQVIVSGYRMRLRDLCNSSTLS
EFLTIQNRTAAMDSEAFICSLPKEKLHAAEQAFRANLNPLKPLQRRISFSSSLRDLSETV
EALRESLGKLVKELLSMKSWSDMRQEVMFLTNVNTSNSSTQIYQAVSRIVCGHPEGGGLK
IKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCNELMKNLESSPLSRIIWRALKPL
LIGKILYTPDTPAIRRVMTEVNRTFQELGVFRDLGGMWEEISPKIWTFMESSQEMDLIRT
LLKSKAFWDLHLPASNWTVEDLSRFLSNHPEDFETGNDSVYTWVDAFNETDRAIQTISRF
MECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVFTEIAPNSIELPQHVKYKIRMDID
NVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVQTGTEKTTGVYVQQ
MPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGIL
WLSWFISSLVPLLMSAGLLVFILKMGNLLPYSDPSVVFVFLSIFGVVTILQCFLISTVFS
RANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFASLLSPVAFGFGCEYFALFEEQG
VGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMTWYIESVFPGQYGIPRPWYFPFT
KSYWFGEKPQDRQHHHSDQKGPSEVCKEEEPMHLSLGVSIQNLVKVYRDGKKVAVDGLTL
NFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILGKDIRSELSTIRQNLGVCPQH
NVLFDLLTVEEHIWFYARLKGLPQKKVKEEMEQMAMDVGLPHKLKARTSKLSGGMQRKLS
VALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIA
IISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTVSYLKKDDSVSQSS
SDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDIGHELTYVLPYKAAKEGAFVELF
HEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETSDGTLPARRNRRVFGDRQSCL
RPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMTGWKLTQQQFTALFWKRLLIAKR
SRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQPWMYDEQYTFISNDAPEDAGTQ
RLLDALLNKPGFGTRCMQGHSIPDTPCTMGQREWTTASVPESVLDIFLKGNWSMENPSPS
CECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLTGRNISDYLVKTYVQIIGKSLK
NKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKKILELAQGSAGDRFLNSLASFMK
GLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQHGKNPSAYGITAFNHPLNLTKQQ
LSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLAN
FVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLALLLFLYGWSITPLMYPASFVFKI
PSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDM
VKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGAVFFFITVLIQYRFFIKPRPVY
AKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKIYRMKRKPAVDRICVGIPPGECF
GLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNIREVYQNMGYCPQFDAVNELLT
GREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKYAGNYSGGNRRKLSTAIALIGG
PPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRF
RCLGSVQHLKNRFGDGYTIVVRIAGANPNLKPVEEFFGHAFPGSVLKEKHRNMLQYQLPS
SPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHTKDLSLHKNQTVV
DIAILNSFLQDEKVKESCV
NT seq
6362 nt
NT seq
+upstream
nt +downstream
nt
acttgaaacttcgggatttcctggttgacaatgagacattctcagacttcctccatcata
atgtgtccatgccatcatctgcagtagaggagctgctgggcgcagaggtcaacctccagc
aggtcattgtgtctggttaccgaatgcgactgcgagatctctgcaatagctcaacactgt
ctgaatttcttacaatccaaaatcggacagcggccatggactctgaagccttcatttgca
gcttgccaaaggaaaaactccatgcagctgaacaagctttccgtgctaacctgaatcctt
tgaagccccttcagagacgaatttctttcagttcctccttgcgtgatctgtcagaaacag
tggaagctttgagagagagccttggaaagcttgttaaagagttgctgagcatgaagagct
ggagcgacatgaggcaagaggtgatgttcctgaccaatgtgaacacctcaaactcctcta
cgcagatctaccaggcagtgtcacgcattgtgtgtggccatcccgaaggtggagggctca
aaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggcaaca
gcactgaagatgatgtaactaacttctatgataactccacaacaccctactgcaatgagc
tgatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaaccct
tgctgattgggaagatcttgtacactccagacacaccagccataaggagagtcatgactg
aggtgaacaggacgttccaggagctgggtgtgtttcgtgacctcggagggatgtgggagg
agataagcccaaagatttggacgtttatggaaagtagtcaggaaatggatctcattcgga
cgctgctgaaaagcaaagccttctgggacctgcacttgccggcttccaactggacagtgg
aggacctttcccgtttcctgtcaaaccatccggaggactttgagacaggaaacgactcag
tgtatacctgggtggatgccttcaatgagacagatcgggctatccagaccatctcccgct
tcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccggctcataa
acaagtcactggagcttctggatgaaaggaggttctgggctggcgtagtcttcactgaaa
tagctcctaacagcatagagctccctcaacatgtgaaatacaagatacgcatggacattg
ataatgtggaaaggaccaacaagatcaaggacgggtattgggatcctggtccccgtgctg
atccctttgaggatatgcgctatgtttggggaggctttgcctacctgcaggatgttgtgg
aacaggccatcatcagggtgcagacaggcacggagaagacaacaggagtttatgtgcagc
agatgccctatccatgttacgtggatgacatattcctgcgtgtcatgagccgctccatgc
ctcttttcatgactctagcctggatttactcagtggctgtgataattaagggcattgtat
atgagaaggaagcccggctgaaggagacaatgcggattatgggacttgacaatggcattc
tttggctaagctggttcattagcagcctcgtccctctcctgatgagcgcaggcctgctgg
tgttcatccttaagatggggaatctgctgccttacagtgaccctagtgtggtgtttgtgt
tcctctcaatcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtgttct
ccagggccaacctggcagctgcctgtgggggcattgtttatttcacgctgtacctgcctt
atgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatctttgcgagtc
tcctgtctccagtagcctttggctttggttgtgagtactttgcgctgtttgaagagcagg
gagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggctttagca
tcaccacatctgctgtcatgatgttgttcgacaccttcctatatggagtcatgacctggt
acattgagtctgtcttcccaggccagtacgggattcccaggccctggtactttcctttca
caaagtcctattggtttggtgagaaaccacaggacaggcagcaccatcattctgaccaga
aggggccttcagaagtctgcaaggaggaagaacctatgcatctgagccttggtgtttcca
tccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctcacac
tgaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaaacca
ctaccatgtccatcttgactggcttgttccccccaacctcgggtacagccttcatcctgg
gcaaagatatccgctctgagctcagcaccatcaggcagaacctgggcgtctgtccgcagc
acaatgtgctgtttgacttgctgactgtggaagagcacatctggttctacgctcggctca
aagggctgccacaaaagaaggtgaaagaggagatggaacagatggcaatggatgtcggtt
tgcctcacaaactgaaagctaggacaagcaaactctctggtggcatgcagaggaagctct
cagttgccttagcctttgttgggggctccaaagttgtcattctggatgagcctacagctg
gggtggatccttattctcgcagagggatatgggaattactcctgaagtatcggcaaggcc
gcactatcatcctctccacacaccacatggatgaggcagacattctgggggaccggattg
ccatcatttctcatggcaagctctgctgtgttggctcttctcttttcctgaagaaccagc
tgggaacaggctattacttgaccctggtcaagaaggatgtggattcatctctgagctcct
gccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccagagca
gctctgatgctggccttggcagtgaccatgaaagtgacacgttgacaatagatgtctctg
caatttcaaatctcattacaaagcatgttcctgaggccaggctggtggaggacatcggcc
atgaattaacctatgtcttgccatacaaggctgctaaagagggagctttcgtggagctgt
tccatgaaattgatgaccgcctctctgatcttggcatttccagctatgggatctctgaaa
ccaccctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaaactt
cagatgggacattgccagccagaaggaacaggcgcgtgtttggagacagacaaagctgcc
ttcgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatccagaat
ccagagagacagaccttctcagtgggatggatgggaaaggatcctaccagatgacaggct
ggaagctcacccagcagcagttcacggctctgttctggaagaggctgcttattgctaaga
gaagccggaagggcttctttgctcagattgtgctgccagcagtatttgtgtgtattgctc
tcatgttcagcctgatcgttcctccctttgggaagtatcccagccttgaattacagccct
ggatgtatgacgagcagtacacttttattagcaatgatgctccagaagatgcaggcactc
agaggcttttggatgcccttctcaataagcctggttttggaacacgctgtatgcagggac
actccatcccagacactccttgcaccatggggcagagggaatggaccaccgcatcagtcc
cagaatcagtcctggacatattcttgaaaggcaactggagcatggagaacccttccccat
cttgtgagtgcagcaatgagaagatcaagaagatgttgcctgtgtgcccccctggtgcag
gtgggctgccacccccacagcgtgagcaagatactgctgacatcctccagaatctgactg
gccgcaatatatcagactacctagtgaagacctacgtgcagatcattgggaaaagcttaa
agaataagatctgggtgaatgagttccggtatggtggcttctccttgggagccagcagtt
ccctcatgcttcctccaagccatgaagtcactgatgccattaaacaggtgaagaaaatct
tggagctagcacaggggagtgccggagatcggtttctcaacagcttagcaagtttcatga
aaggcctggatacaaagaacaacgtgaaggtgtggttcaacaacaagggctggcatgcca
ttgcctccttcctgaatgtgatcaacaacgccatccttcgggccaacctgcagcacggca
aaaaccctagtgcttatgggatcactgccttcaatcatccactcaacctcaccaagcaac
agctctctgaagtggccctgatgaccacctccgtggatgtcctagtctccatctgtgtga
tctttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaacgtgtca
gcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactggctggcca
actttgtctgggatatgtgcaattacattgttccagccacactagtcgtcatcatcttca
tctgcttccagcagaagtcctacgtatcctcctccaacttgcctgtgctggctcttcttc
tgtttctctatgggtggtctatcacccctctcatgtatccagcctccttcgtgttcaaaa
tccccagcacagcatacgttgtgctgaccagtgtgaacctcttcattggcatcaatggta
gtgtggccacctttgtcctggagctcttcaccaacaataagctgaacaacatcaatgaca
tcctgaagtctgttttcctcatcttcccccacttctgcctaggccgaggactcattgata
tggtgaaaaaccaggccatggctgatgctctggagaggtttggagaaaatcgttttgtgt
cccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagagggcgctg
tcttcttcttcatcacagtgctcatccagtacaggttcttcatcaagcccaggcctgtct
atgccaagctgcctcctgtcaatgatgaagatgaggatgtaaccagagagagacagagga
taattagtggaggaggacagagtgacatcttggaaatcaaggagctaaccaagatttaca
gaatgaagcgaaagccagccgttgataggatctgtgttggaatcccccctggagagtgct
ttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaactggtg
atacagatgtgacaggaggagaagctttcctcaaaggaaacagtattttgtccaacatcc
gagaagtctatcagaacatgggctactgcccacagttcgatgctgttaatgaactgctga
caggacgagagcacttggagttctttgcactcttgagaggtgttccagagaaagaagtct
gcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatacggagaaaaatatg
ctgggaattacagtggtgggaacaggcgcaagctctccacagccattgccctcattggag
ggccacccgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgtcgtt
tcttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtactcacgtctc
acagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaatgggcgat
tcaggtgtctgggcagtgtccagcatctaaagaacaggtttggagatggttacaccatag
tggtgagaattgcaggggctaacccaaacttgaagcctgttgaggagttctttgggcatg
ccttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccagcttccct
cttcaccatcctccctggccagaatattcagtattctctcccagaacaaaaagagactcc
acatagaagactactcagtttctcagaccacacttgaccaagtatttgtaaattttgcta
aggaccaaagtgacgacgaccacactaaggacctgtcattgcacaaaaaccagactgtgg
tagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaaagttgtgtgt
ga
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