KEGG   Balearica regulorum gibbericeps (East African grey crowned-crane): 104643832
Entry
104643832         CDS       T09009                                 
Symbol
COL6A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VI) chain
  KO
K06238  collagen type VI alpha
Organism
breg  Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04510  Focal adhesion
breg04512  ECM-receptor interaction
breg04518  Integrin signaling
breg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:breg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104643832 (COL6A2)
   04518 Integrin signaling
    104643832 (COL6A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104643832 (COL6A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104643832 (COL6A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:breg04147]
    104643832 (COL6A2)
   00536 Glycosaminoglycan binding proteins [BR:breg00536]
    104643832 (COL6A2)
Exosome [BR:breg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104643832 (COL6A2)
Glycosaminoglycan binding proteins [BR:breg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104643832 (COL6A2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   104643832 (COL6A2)
SSDB
Motif
Pfam: VWA Collagen VWA_2
Other DBs
NCBI-GeneID: 104643832
NCBI-ProteinID: XP_010311562
LinkDB
Position
Unknown
AA seq 1024 aa
MFREAFFSTLLCVVLVPLHAQFDGDPGDVSPTSCAEKRNCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFIDKLENELYQNQVYITWQFGGLHYSDVVEVYSLLTSSKDIFLPRL
SAINYLGRGTFTDCAISNMTEQIQTQMASGVNFAIVITDGHVTGSPCGGMKMQAERARDM
GIKLFAVAPSENVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTIDRIIQAMKHEAY
AECYKMSCLEIVGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GVRGDEGIKGDPGRPGRSGPPGPPGEKGSPGLPGNPGAQGPAGSKGIKGEMGPPGPKGEP
GRRGDPGTKGSKGTPGSKGERGDPGPEGPRGLPGEVGNKGARGDQGLPGPRGPSGVVGEP
GKIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELG
PKGVQGTKGEKGEPGDPGPGGEPGPRGPTGEAGPEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGVV
QYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVDVVFLLDGSER
IGEQNFHRAHHFVEEVARQLTLARSNSDNMNARIALLQYGSERDQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVLSPGDGQRLARRNAELSFVFITDGITGSKNLEEA
INSMKKQDVMPTVVALGSDVDMDVPLXXXXXXXXXXDRAAIFREKDYDSLSQPSFFDRFI
RWIC
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgttccgagaagcctttttttccacactcctttgtgtggttctggttcctctccacgct
cagtttgatggggatcctggagatgttagtcctacctcctgtgcagagaagaggaactgc
cccatcaacgtgtacttcatcattgacacctcggagagcgtcgctctgcagacggtgccc
atccagagcctcgtggatcaaataaagcggttcatccctgtgttcatcgataaactggag
aatgagctctaccagaaccaagtctacatcacttggcagtttggtggacttcattactca
gatgtggtggaggtttatagtcttttaacgagcagcaaagacatattcctccccaggctg
tccgctattaattaccttggccggggcaccttcacggactgtgccatctccaacatgacg
gagcagatccagacccagatggcctcaggtgtgaactttgcgatagtcatcactgacggc
cacgtcaccggcagcccctgcggggggatgaagatgcaggctgaaagggcgcgagacatg
gggatcaagctcttcgcggtggcccccagcgagaacgtctacgagcagggactgcgggag
atcgccaacctgccgcacgagctgtaccgcaacaactacgccatcacacagaaagacacc
ctggacatcgatgtgaacaccatcgacaggataatccaagctatgaaacacgaagcctac
gcagagtgctacaagatgagctgcctggagattgtgggtccgcctggtcccaagggatac
cgagggcagaagggtgcaaaggggaacatgggtgagccaggctcccctgggctgaaggga
cgacagggtgacccaggtatcgaaggtccgattggataccctggtcccaagggtgtccca
gggctgaaaggagagaagggcgagattggatccgatggacggaggggtgccgctggtttg
gcaggcaggaacggcaccgacggacagaagggcaagctggggagaattggacctccgggc
tgcaagggagaccccggtgacaagggccctgatggctacccaggagatgcaggagaccaa
ggtgtaagaggagatgaaggcataaagggagatcctggccggcctggtcgcagcggaccc
ccaggacctccaggagaaaaaggaagcccgggacttccaggcaaccctggagctcaaggg
cctgctggaagtaagggaataaaaggtgaaatgggacctcctggacccaaaggagagcct
ggtcgacgtggagatccagggacaaaaggcagcaaaggcactcctgggtccaaaggagaa
aggggagatcctggtccagagggtcctcgtggcctgcccggcgaggttggaaacaaagga
gcaaggggagaccaaggactgccaggaccccgaggcccttcaggtgttgtgggagagcca
ggcaagataggatcgcgtggggaccctggcgacttgggcccgagaggtgacgccggacca
ccaggaccaaagggtgacagaggcagacctggctttagctaccctggacccagaggaccg
cagggtgacaagggtgagaaagggcagccggggcccaagggaggaagaggtgagcttgga
ccaaaaggagtgcaagggaccaaaggagagaagggggaaccgggtgatcctggcccagga
ggtgagcccggaccccgcggtccaactggtgaagcaggccctgaggggacccccggccca
ccaggagatcctggcctgactgactgcgacgtgatgacctacgtgcgagagacatgcgga
tgctgtgactgtgagaagcgctgtggtgccctggacatcatgtttgtcatagacagctcg
gagagtattggctacaccaacttcaccctggagaaaaattttgttgtcaacgtggtcagc
cggctgggctctattgccaaggaccccaagtcacagacaggtgcccgtgttggggtggtg
cagtacagtcatgaggggaccttcgaagccatcaagcttgatgatgagcgcattgattca
ctgtcgagcttcaaggaagcagtgaagcgcctggagtggattgctggaggcacctggaca
ccgtctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggcgggagaaagcc
caagtgtttgctgtggtgatcacggatgggcgctacgacccccgggatgatgacaagaac
ctaggggctctttgtggtagagatgtggtcgtcaacaccattggcattggagacatgttt
gatcagccagaacagagcgagaccctggtctccatcgcctgcaacgaaccccagcgagtc
cagaagatgaggctcttctcagacctggtggcagaggagttcattgacaagatggaggac
gtgctctgcccagatccacagatcgtctgtcccgagctgccctgtcagacagagcttgcg
gtggcccaatgcacgcagcgccccgttgatgtcgtcttcttgcttgatggctctgaaagg
attggggagcagaatttccacagagcccaccactttgtggaggaggtggcccgacagctc
acgctggccaggagcaacagcgacaacatgaatgcccggattgcgctgctgcagtatggc
agtgagagggaccaggatgtggtcttcccactgacctacaacctgacggaaatctccaat
gccctggcacagatcaagtacctggactcatcctccaacattgggtcagccatcatacac
gccatcaacaacatcgtgctcagcccaggagatgggcagcgactggcccggcgcaatgcc
gagctctccttcgtcttcatcactgacggcatcacaggaagcaagaacctcgaggaggcc
attaactccatgaagaagcaggacgttatgcccacagtagtggctctcgggagtgacgta
gacatggacgtcccgctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaccgggcagcc
atcttccgggagaaggactatgacagcctctcccagcccagcttctttgacaggttcatt
aggtggatatgttaa

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