Brevibacillus sp. HD3.3A: HP435_00645
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Entry
HP435_00645 CDS
T10166
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03030
DNA replication
breh03430
Mismatch repair
breh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HP435_00645 (holB)
03430 Mismatch repair
HP435_00645 (holB)
03440 Homologous recombination
HP435_00645 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breh03032
]
HP435_00645 (holB)
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_00645 (holB)
Enzymes [BR:
breh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HP435_00645 (holB)
DNA replication proteins [BR:
breh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HP435_00645 (holB)
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HP435_00645 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
PTS_EIIC_2
DUF2031
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UED69247
LinkDB
All DBs
Position
104296..105276
Genome browser
AA seq
326 aa
AA seq
DB search
MTWTRFSQQPRASELLYHSLLNNRLAHAYLLAGPKGAGKKQMALHLAKSLFCPEREADAC
GACLTCRRIEGGNHPDVLFITPDGASIKIDQIRALQKEMAMRAVESKHKVYIIEHVDKMT
TQASNSLLKFLEEPPAGVLALLLTEHSHSILPTILSRCQIVQFSPLSAEAIAAQLRSDGI
SAGMAQIASHITTNVEEAKALSQSESFAQLRNLVIQLSHECKQRNSSALFTIHDMLQKSD
KIKEELPLFLDLLILWLRDILYVQVGRHAHLINSDQQDVLQGQALVWTKAELLHGIDLVM
DTKNRIERNANAQLALERLVLQFQEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacatggacccgtttttcccagcagccgagagcttccgagctgctgtatcatagcctg
ctcaacaacagattggcacacgcctatttattggctggtcccaaaggagcgggtaaaaag
cagatggccctgcatctggcgaagtcccttttttgtccggaaagggaagcggacgcctgc
ggggcctgtcttacatgcaggcggattgaagggggaaaccaccccgacgtcctgtttatt
acacctgatggagcttctattaaaatcgaccagattcgcgcgctgcaaaaagaaatggcc
atgcgtgcggtagagtccaagcacaaggtgtacatcatcgaacacgtcgacaaaatgacg
acgcaagcttccaacagcctgctgaagtttttggaggaaccgcccgctggtgtactggcc
ttgcttctgacggaacatagccactcgatcctcccgacgattttatcccggtgccaaatc
gtgcaattctctccactttctgccgaagccattgcggcacagctgcggtcagacggcatt
tctgccgggatggcgcagattgcctcccacattacgacaaatgtggaagaggccaaggca
ctcagccaatcagaatcgtttgcacagctaagaaatctagtgatacaattgagccatgag
tgcaaacagcgtaattcgtctgcgctcttcaccatccatgatatgttgcaaaagagcgac
aaaatcaaagaggaactacccctctttttagatttgctcatcctttggctgcgcgatatc
ctgtatgtgcaagtaggcaggcatgcccatctcattaacagcgaccaacaggatgtgctg
caaggacaagcactggtatggacaaaagctgagctcttgcacgggatagatttggtcatg
gatacgaaaaatcggatagagcgaaacgccaacgcacagttggctcttgagcggttggtt
cttcaattccaggagggataa
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