Brevibacillus sp. HD3.3A: HP435_01450
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Entry
HP435_01450 CDS
T10166
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03020
RNA polymerase
Brite
Enzymes [BR:
breh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HP435_01450 (rpoC)
Transcription machinery [BR:
breh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HP435_01450 (rpoC)
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HP435_01450 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UED71856
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Position
251210..254833
Genome browser
AA seq
1207 aa
AA seq
DB search
MDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECH
CGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMS
PRSLEEVIYFASYVVTDPGDTPLDKKQLLSEKEYRNYREKYGHSFQAMMGAEAIKRLLAE
IDLDKDVETLKEDLKTAQGQRRNRAIKRLEVLEAFRNSGNHPDWMVLDVLPVIPPELRPM
VQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVQNEKRMLQEAVDALIDNGRR
GRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKEM
ALELFKPFVMKELVSKGLAHNIKSAKRKVERVQPEVWDVLEDVIREHPVLLNRAPTLHRL
GIQAFEPVLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNILN
PKDGKPVVTPSQDMVLGSYYLTLEREGDKGEGTIYRDPHDAIAAYQQGFISLHTRIVLPA
RRLNKTSFTERQQNALIVTTVGKVIFNEIFPPDLPFINVPTKSNLQNMVPDEYFIFDKGT
NVTEFVRNLPDPGAVKKGFLGTIISECFRRFGTMKTSMILDRIKELGFTYSTKAGITIAV
ADIAVPGKKKDILDEADQKVATVMTQFRRGLITEDERYDRVISIWSKAKDEVTEVLMKSM
DKFNAIFMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIST
HGARKGLADTALRTADSGYLTRRLVDVAQDVIVREKDCGTDKGIRVTAIKDGREEIEKLS
DRLVGRTCFETLRHPETKEVIIGRNEEISEEVAEYIEKVGITSVYIRNVLACRTSHGVCK
LCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIDGEVVDIREGKDRREIEVRGEAENKVYAAPYGSRIKVSVGVKLSAG
DELTEGSVDPKEMLKVRGMRGVSNYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKLRVI
DSGDTDLLPGSYVEVPEFEQANAKVLIEGKNPAVGRPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMSRYRNVKVASQVDYEAELEALKAE
QEAVSVE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atagacgtgaacaacttcgaatatatgaagatcggcttggcttcccccgataagatccgt
tcgtggtctttcggggaagtgaaaaagccagagacgatcaactaccgcacactgaaaccg
gaaaaagacggcttgttctgcgaacgcatctttggaccgaccaaagactgggagtgccat
tgcggtaagtacaagcgtgtacgttataaaggtgtagtgtgcgaccgttgcggcgtggaa
gtgacccgcgccaaagtacggcgtgagcgcatggggcatattgaactggctgccccagtt
tctcacatctggtatttcaaagggattccaagccgcatgggcttggtgctcgacatgtcc
ccgcgttccctggaagaagttatttacttcgcttcttatgtagtaactgatccaggtgat
acaccactcgataaaaagcagctgctctcggaaaaagagtaccgcaactatcgtgagaag
tacggccactctttccaagcgatgatgggagctgaggcgatcaaacgcctgctcgcggaa
atcgatctggacaaagatgtggaaacgttgaaagaagacctgaaaacagcacaaggccaa
cgtcgcaaccgtgcgatcaaacgtctggaagtgcttgaggcattccgcaactccggaaac
cacccggattggatggttctggacgtactgccggtaatcccgccagagcttcgcccaatg
gttcaactcgatggtggacgttttgccacttccgacttgaatgacctgtaccgtcgcgta
atcaaccggaataaccgtctgaagcgcctgcttgaactgggtgctcctgacattatcgta
caaaacgaaaaacggatgctgcaggaagcagtagacgcacttatcgacaacggtcgtcgc
ggccgtccggtaactggaccaggtaaccgtccgctgaaatctctcagccacatgctgaaa
ggtaaacaaggacgtttccgccaaaacttgctcggtaagcgcgttgactactccggtcgt
tccgttatcgttgtaggacctaatctgaagatgtaccagtgcggtttgccaaaagaaatg
gcattggaactcttcaaaccgttcgtgatgaaagagctcgtttccaaaggactcgctcat
aacatcaagagcgccaaacgcaaggtagagcgcgttcagcctgaagtatgggacgttctc
gaagacgtgattcgcgagcatccggtgcttctgaaccgtgcccccaccttgcaccgtctg
ggtatccaggctttcgaaccagtattggttgaaggccgtgcgatccgtttgcacccgctc
gtttgtacagcgtacaacgccgacttcgacggtgaccaaatggcggttcacgttccgttg
tccgcagaggcgcaggcagaagcccgtatcctcatgctggcagcgcaaaacatcttgaac
ccgaaagacggtaaaccagtagtaacgccatcccaggacatggtgcttggttcttactat
ctgacactggaacgtgaaggcgacaaaggcgagggtacgatctatcgcgatcctcatgat
gcgatcgctgcttaccagcaaggcttcatcagcttgcatacgcgcatcgttttgccagcg
agacgcctgaacaaaaccagctttactgaacgccaacagaacgcgctcatcgtaacgaca
gtagggaaagtgatcttcaacgagatcttccctccagatttgccgttcatcaacgttccg
accaaatcgaacctgcaaaacatggttcctgacgaatactttatttttgacaaaggtacc
aacgtaaccgagtttgtgcgcaacctgccagatccgggtgcagtgaaaaaaggcttcctg
ggaacgatcatttccgagtgcttccgtcgcttcggcacgatgaaaacttccatgattctc
gacagaatcaaagagcttggcttcacgtactccactaaagcgggtatcacaatcgcggta
gcggacattgccgtacctggcaagaagaaagacattctcgatgaagcggatcaaaaggtt
gcaactgtcatgacgcagttccgccgtggtctgattactgaggatgagcgttatgaccgc
gttatctccatctggtccaaagccaaggatgaggtaaccgaggtactcatgaagtccatg
gataagttcaatgcgatcttcatgatggcgaactccggtgcccgcggtaacgtatcccag
atcactcagctcgctggtatgcgcggtctgatggcgaacccatccggtcgaatcatcgag
ttgccgatcaaatccaacttccgtgaaggtctgactgtattggagtactttatctccacg
cacggtgcgcggaaaggtctcgccgatacggcgctgcgtactgcggactcgggttacttg
acccgtcgtctcgtagacgttgcccaagacgtgatcgtccgcgaaaaagattgcggtaca
gataaaggtattcgtgttacagcgatcaaggatggccgtgaagaaatcgagaagctgtct
gaccgtctggttggacgtacatgcttcgagactctccgccacccggaaacaaaagaagtc
atcatcggccgcaacgaggaaatttccgaagaggttgccgagtatatcgaaaaagtgggc
atcacaagtgtctacatccgtaacgtacttgcttgccgcaccagccatggtgtctgcaaa
ctttgctacggacgcaacctggcaacaggagccgaagtggaagttggggaagcggttggt
attattgccgctcagtccattggtgagccgggtacccagctgaccatgcgtaccttccat
accggtggggttgcgggagacgatattacccaaggtttgccgcgtattcaagagttgttc
gaagcgcgcaatccgaaaggtcaagccgttatttctgaaatcgacggggaagttgtcgac
attcgtgaaggtaaagaccgtcgtgaaatcgaagttcgcggtgaagcggaaaacaaagtg
tacgctgctccatacggctcgcgcatcaaagtatctgttggtgtcaagctgagcgctggt
gacgagctcacggaaggttccgtcgacccgaaagaaatgctcaaagttcgcggcatgcgc
ggcgtttccaactacattttgcaagaggtacaaaaagtttaccgcatgcagggtgtagaa
attaacgacaagcacgttgaggttatgatccgtcagatgctccgcaagctgcgcgtcatc
gacagcggagatacagacctcttgccaggctcctatgtggaagttcctgagtttgagcag
gcgaacgcaaaagttctcatcgaaggcaaaaatccagcagtgggtcgtccggttcttttg
gggattacaaaagcatccctggaaaccgactccttcctgtcggcggcttccttccaggag
acaacgcgcgttctcacagacgcagcgatcaaaggaaaagtggatcgcctgctcggtctg
aaagaaaacgtgattatcgggaaacttgttccggcaggtaccggtatgtctcgctatcgc
aatgtaaaagtagcaagtcaggttgattacgaagcagaactcgaagctctcaaagctgag
caagaagcggtttctgtagagtaa
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