Brevibacillus sp. HD3.3A: HP435_03925
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Entry
HP435_03925 CDS
T10166
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
breh Brevibacillus sp. HD3.3A
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
breh03009
]
HP435_03925 (rlmD)
Enzymes [BR:
breh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HP435_03925 (rlmD)
Ribosome biogenesis [BR:
breh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HP435_03925 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Methyltransf_15
PrmA
Cons_hypoth95
Methyltransf_11
Methyltransf_32
Methyltransf_12
Methyltransf_23
N6_N4_Mtase
TPMT
Motif
Other DBs
NCBI-ProteinID:
UED69806
LinkDB
All DBs
Position
737489..738922
Genome browser
AA seq
477 aa
AA seq
DB search
MAKTTKRRRRPQQTAKVELDVPVRVGQTVEVEITGLNHEGAGVGRIEGYTLFVDGALAGE
RVHARVDHVKKNFGFAKLTKVSVASTFRSQPPCPLYDRCGGCSLQHLAYEEQLRHKQQIV
RDNLRRIGGFQVEGDGAITVHPTLGMSEPWRYRNKAQVPIGEENGALVGGFYAEKSHSII
DMHECLIQHQKNDEAVATVKKAATALGIKPYDEVRGSGLLRHVVVKVGVKTGEVMVVLVT
TEETIPQRDKLVEAIRTEVAGVTSIVQNINPDKTNVIFGKKTVTLWGSDVIYDYIGAIKF
AISARSFYQVNPAQTEVLYNKTLEYAGATGTETVIDAYCGIGTISLFLAQKSKHVYGVEI
VPEAIEDANRNAKLNGVENATFEAGPAEVVIPAWKEQGIRADVIVVDPPRKGCDEALLTT
ILEMQPERVVYVSCNPSTLARDLKVLAEKYEVREVQPVDMFPHTAHVESVTLLKLKC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaacaacaaaaagacggcgcagaccgcagcaaactgccaaggtagagctggac
gttccggttcgtgtcggacaaactgtggaagtggagataaccggactgaaccacgaaggc
gctggcgtcggccggattgaaggatatacgctgttcgtcgacggcgcactcgcaggagag
cgcgtccatgcgcgcgtcgaccatgtcaaaaagaacttcggcttcgccaaactgaccaaa
gtgtcagtagcgagcacattccgctcacagccgccctgtccgctgtacgaccgttgcggc
ggctgttcgctgcagcacttggcatacgaggagcaactgcgtcacaagcagcaaatcgtg
cgggacaacctgcggcgcatcggcggcttccaggtggagggagacggagcaatcaccgtt
cacccgacactcggcatgagcgagccgtggcgttaccgcaacaaggcccaagtgccaatc
ggtgaggaaaacggcgccttggtcggcggattttacgccgaaaagtcccattccatcatc
gacatgcacgaatgcctcatccagcaccaaaaaaacgacgaggcggtcgcaacggtgaag
aaggccgcaactgcccttggcatcaagccatacgatgaagtgcgcggctcaggcttgctc
cgccatgtggtcgtcaaagtcggggtcaagacgggagaagtcatggtcgtgctcgtgacg
accgaggagacgattccgcagcgtgacaagctcgtggaagcgatccgcaccgaggtggcg
ggcgtaacgagcatcgtgcaaaacatcaacccggacaagaccaacgtcattttcggcaaa
aagacggtaacgctctggggcagcgatgtcatctacgattacatcggagcgatcaaattc
gccatctcggcgcgctcgttctaccaggtcaaccccgcccagacggaagtgctgtacaat
aaaacgctggaatacgccggagcgacaggaaccgaaacggtcatcgacgcctactgcggc
atcggaacgatctcgctctttttggcgcaaaagtccaagcatgtctacggcgtggaaatc
gtcccagaagcgatcgaggacgccaaccgcaacgccaagctgaacggtgtggaaaacgca
acgttcgaggcaggccccgcggaggtcgtgattcccgcgtggaaagagcaaggaatacgg
gccgatgtaattgtcgtcgacccgccacgcaagggctgcgacgaggcgctgttgacgacg
attttggagatgcaaccagagcgcgtggtgtacgtgtcgtgcaacccgtccacgctggcc
cgggatttgaaggtgttggcggagaagtacgaggtgcgggaagtgcagccggtggatatg
tttccgcatacggcgcatgtggagagtgtgacgttgttaaaacttaagtgctag
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