Brevibacillus sp. HD3.3A: HP435_05980
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Entry
HP435_05980 CDS
T10166
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03420
Nucleotide excision repair
breh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HP435_05980
03430 Mismatch repair
HP435_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_05980
Enzymes [BR:
breh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP435_05980
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HP435_05980
MMR (mismatch excision repair)
Other MMR factors
HP435_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
AAA_16
DEAD
ResIII
AAA_30
SLFN-g3_helicase
NACHT
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UED70176
LinkDB
All DBs
Position
complement(1173946..1176312)
Genome browser
AA seq
788 aa
AA seq
DB search
MSATDQERQNEQQRVETVITEISNRITDLEQQVQVVSEDIVGIRKHFWDDVTVNFEDATE
AIETYVSIKQQAEVLSERERSQRHAQNQLRTMQRLMHSPYFGRIDFHEETEPGSERIYLG
IASLLDKNDEHFLIYDWRAPISSLYYDYSPGPAHYDTPSGVVSGEITCKRQYIIRDGQLL
HMFDTGVTIGDELLQEVLGKQADSQMKSIVATIQRDQNRIIRNEKSRLLIVSGAAGSGKT
SAALQRVAYLLYRYRKTLTAEQIVLFSPNSLFNSYISTVLPELGEENMQQTTFQEYAQHR
LGDSFSLENSLEQMEYVLTAHDEPDYEARLAAIRCKSSAPFLRVMNQYADRLMRGGIVFR
PISFRQGTLISAAHIQELFYSHDTSLPIPNRMALVARALLAEVKQLERRERSKPWVEDEV
QLLDKDAYVAAYQQLRRKKQFRDDSFDDFDREQELLAKRVVKQHFQPVRDSIASLQFIDI
QATYRQMYADQALLDQLLSAEPSLSSAAWPAICSLTLECLDQGKLTQEDIPPYLYLQERL
EGKQTNNLVRHVFLDEAQDYSAFQFALIKNLFPRAKMTVLGDWNQAIYAHAAHDESFGTV
SSLFEPEETETFVLTKSYRSTLPIVRFTKQLVAGGEQIEPFNRDGRMPTVTKVHSDAELT
QQIVERVKKLSANGHKTIAVITKTAAEAEKAHQSLAALLPIRLITTSTLSYDTGNLVIPS
YLAKGVEFDAVILYDASAKSYSRESERKLFYTACTRAMHELHLYYRDAKTFLLDHVSASS
YEHLETDN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctactgatcaagaaaggcaaaacgagcagcaacgggttgagacagtcatcact
gaaatcagcaaccggatcaccgacctcgaacagcaagtacaagtcgtaagtgaagatatc
gtcggaatccgcaagcatttttgggacgatgtgaccgtcaacttcgaggatgccaccgag
gcgatcgagacgtacgtcagcatcaagcagcaagctgaagtattgtcggagcgggagcgc
agccagcgtcatgcccagaatcagttgcgtaccatgcagcgattgatgcactctccctat
tttggccggattgattttcacgaagaaaccgagcctggttcagaacgcatttatctcgga
atcgcctctttgctggacaaaaacgacgagcattttctcatttatgactggcgggcaccg
atctccagcctgtactacgactattcccccggcccggctcactatgacacgccaagcggg
gtcgtctcaggagagattacgtgcaagcggcaatatatcatccgcgatggacaactgctt
cacatgttcgatactggcgtgaccatcggcgacgagctgcttcaggaagtgttgggcaag
caagccgattcgcaaatgaaaagcatcgtcgccacgatccagcgtgaccagaaccggatt
attcgcaacgaaaaaagccgcttgctgatcgtctccggggcagccggcagcggcaagact
tcggccgccctgcaacgggtcgcctatttgctctaccgctatcgcaagactttgaccgca
gagcagatcgtcctgttttcccccaactcgctgttcaacagctacatctcgacggttctt
cccgagctgggcgaggaaaacatgcagcaaacgacttttcaagagtacgcccagcatcgg
cttggcgattccttttccctggaaaattcgctggagcaaatggaatacgtgcttaccgcc
catgacgaacctgactacgaggcaaggcttgcggcgattcgctgcaaatcgtccgcgcct
ttcctgcgcgtgatgaatcagtacgcggatcgcctcatgcgaggaggcatcgtgttccgt
ccgatttcgtttcgccagggcacgcttatttccgccgcgcacatacaggagctgttttat
tcccatgacacctctctgccgatcccgaaccggatggctctggtggcacgagctttgctc
gcggaagtcaaacagctggaacggcgcgagcgcagtaaaccgtgggtcgaggacgaggtg
caattgctcgataaagatgcttatgtagccgcctatcagcagcttcgccgcaaaaagcag
tttcgcgacgattctttcgacgacttcgaccgcgagcaggagctgctggcaaagcgggtg
gtcaaacagcattttcagccggttcgcgactcgattgcttcgctgcaatttattgatata
caggccacttatcgccaaatgtatgccgaccaggcgctgctcgaccagttgctgtcagct
gagccgtccctgagttcagctgcatggcccgcgatctgttcgctgaccctggagtgcttg
gatcaaggcaagctgacacaggaagacattccgccttatttgtacttgcaggagcgcctg
gaaggcaagcagacgaacaatctcgtccgccatgtatttctcgacgaagcccaggattac
tcggcgtttcagtttgcgctgatcaaaaacttgtttccgcgcgccaaaatgaccgtgctc
ggcgactggaatcaggcgatttacgcgcatgctgcgcacgacgaaagcttcggcacagtc
tcctcgctctttgaaccagaagagacagaaacattcgtgctgacgaaaagctaccgctct
accttgccgattgtccggttcacgaagcagctggtcgcaggcggcgagcagatcgagcct
ttcaaccgggatggccggatgccgaccgtgacgaaggtacacagcgacgccgagcttaca
cagcagattgtcgagcgggtgaaaaagctgtcggcaaacggccacaagacgattgccgtc
attacgaaaacagctgcggaagccgagaaagcgcatcagagtctcgctgcgcttttgccg
attcgtctgattaccacctctaccttgtcctacgatacaggcaatctcgtcatcccgtcg
tacttggcaaaaggggtcgagttcgatgccgtcatcctatacgacgcttctgccaagagc
tacagccgggaaagcgaacgcaagctgttttataccgcttgcacacgcgccatgcacgag
ctgcatctttactaccgcgatgcaaaaacgttcttgctcgaccacgtatccgcgagcagc
tacgagcatctggaaacggacaactga
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