Brevibacillus sp. HD3.3A: HP435_06855
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Entry
HP435_06855 CDS
T10166
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03030
DNA replication
breh03430
Mismatch repair
breh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HP435_06855
03430 Mismatch repair
HP435_06855
03440 Homologous recombination
HP435_06855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breh03032
]
HP435_06855
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_06855
Enzymes [BR:
breh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HP435_06855
DNA replication proteins [BR:
breh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HP435_06855
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HP435_06855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
TerL_nuclease
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UED70344
LinkDB
All DBs
Position
1369516..1372944
Genome browser
AA seq
1142 aa
AA seq
DB search
MTSFVHLHVHTEYSLLDGAARIDALVERAKELGMTALAITDHANLYGAVPFYKACTENQI
KPIIGMELYVIEGNLQDRVRNAPPPSHLIVLAENEAGYRNLLKLATIANTDGNYMIPRLN
KEVLARHAEGLIALSGCQHGEVAQLLLAGEAEAAKEAALWHLRVFGEANYFLELADHGLE
SERRLNARLVKLSQETGIPLVVTNNVHYVKQNEHRQHDILLAIKEGKTIDEENRFRYETD
QYYLKSEAEMAAAFSYAPEALANTGKIADRCNLTLSFGAHILPEFPLPEGQDSTQYLRSL
CEQGCRERYKTITPDIQARLDHELSIITGTGFTDYFLIVWDFMRYAHQHGIPTGPGRGSA
AGSLVAYALKITNVDPLHFNLLFERFLNPERVTMPDIDIDFSVERRDEVIHYVAKKYGHD
RVAQIITFGTMAARAAVRDVGRALGLSVGIVDRVAKMIPQSPGMTIDRAMKLIPDIGKLC
QENRQAALLIETAKGVEGLPRHASTHAAGVVISREPLTSYVPLQTGSEGLALTQYPMEVL
EEVGLLKMDFLGLRNLTIIQETLRHLHEQGIAIELESIPTDDPNTFRMLSRGETTGVFQL
ESGGMRNVLRDLKPTSLDDIIAVLALYRPGPMEIIPQYIAAKHGQSAVHYAHPVLEPILR
ETHGFMIYQEQIMQISSTLAGFSLGEADILRRAVGKKKRELLAEQREKFVAGCVRQGYGE
ELGHQVYDLIVRFADYGFNKAHSVAYAVIAYQMAYLKATYPLAFMAALLSLSIGSQTRIA
EYTEEARRLGLRVLGPDVNKSTASFAVEQDAIRFGLAAVKNVGYGAIESIVKERAVRPYR
DVFDFCARVDARLVNRRVVESLTLCGALDSLPGHRSQLLLLLDEAVGKTNAKRIERDANQ
LDLFAGEEQAAPLREPAEYPEVPPMSRAQQLKEERELIGVYISGHPLDQYAHVAARPEVT
AISALSELARDKTVKVFGMITEEKRIQTKKGDPMAFLVLEDKTAQVELVVFPQVFAKYGD
LLGKERMVVAEARVDHQDDMVKLLASRFWDAETLQAPTAETVLFVKISAQQEHDSTLQRL
QRLFVEKKGTIPVILFYEGKRQTIRLPEDIRVEVDESFLEQARDIVGRDSVIQKELPINW
GG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctttgtccatttgcatgttcatacggagtacagcctgctagacggagcggcg
cggattgatgcgctggtggagcgtgccaaagagctgggcatgactgcgctggcgattacg
gatcacgccaatctgtatggcgctgtccctttttataaagcatgtacagaaaaccagatc
aagccgattatcgggatggaattgtatgtgatcgaaggaaacttgcaagatcgcgtgcgc
aatgcgcctcccccgagccatttgatcgtgcttgccgaaaatgaggcgggctatcgcaat
ctgttgaagctcgccacgatcgccaatacggatggaaactacatgattccccgcctgaac
aaagaagtgctggcccggcatgcggaagggttgatcgcccttagcggctgccagcatggc
gaggttgcgcagcttttgttggctggcgaagccgaggcagcgaaagaagcagccttgtgg
caccttcgcgtttttggcgaggcgaattactttttggagctggctgaccacggcctggag
agcgagcgcagactcaatgcccgtctggtcaagctgagccaggagacgggcattccgctg
gtcgtcacgaacaatgtgcactacgtgaagcaaaacgagcatcgccagcacgatattttg
ctcgcgatcaaagagggcaagaccatcgacgaggaaaaccgcttccgctacgaaaccgac
caatactatttgaaaagcgaagcagaaatggccgccgccttttcttacgcacccgaagcg
cttgccaacacgggaaaaatcgcggacagatgcaatctcacattgtcgtttggggcgcac
attttgccggaatttcccttgccggagggccaggattcgacgcaatatttgcgttcgcta
tgcgagcaaggctgccgggagcggtacaagacaatcacgccggacatacaggcgcgtctc
gatcacgagctgtcgatcattacgggcacgggctttaccgattacttcctgatcgtctgg
gacttcatgcgctacgcccatcagcacgggattccgaccggaccagggcgaggctctgct
gccggaagcctcgtcgcctacgcattgaaaataacgaacgtagacccgcttcatttcaat
ctgctgtttgaacggtttctcaatccggagcgggtgacgatgcccgatatcgatatcgac
ttttccgtggagcggcgcgacgaagtcatccattacgtggcgaaaaaatacggtcacgac
cgcgtggctcagattattacgtttggaacgatggcggctcgcgctgcggtgcgcgacgta
ggccgggcactcggcctgtccgtcgggatcgtcgaccgggtagcgaaaatgattccgcaa
tctcccggcatgacgattgaccgcgccatgaagctcattccggacatcggcaagctgtgc
caggaaaacagacaggccgcccttttgatcgagacggcaaaaggcgtggaaggtttgccg
cgccatgcttcgacacatgcggcgggcgtcgtgatctcgcgggagccgctgaccagctat
gttccgttgcagacgggcagcgaaggcttggcactgacgcagtatccgatggaggtgctg
gaggaagtcggtctgttgaaaatggattttctcggcttgcgcaacttgacgatcattcag
gagacacttcgtcatctgcatgaacaggggattgcgattgagctggagagcattccgacg
gatgatccgaatacgttccgcatgttgtcgcgcggcgagacgacaggggtattccagctg
gagtccggcgggatgcgcaacgtgctccgcgacctgaagccgaccagtctggacgatatt
atcgctgtgctggccttgtatcggccgggaccgatggaaattatcccgcagtacatcgcc
gccaagcacggccagagcgctgtgcattacgcgcatccggtgcttgagccgatcttgcgc
gagacgcacggcttcatgatctaccaggagcaaattatgcaaatctcgtctacgctcgct
ggcttcagtttgggtgaggcagacattttgcgccgggcggtcggaaagaaaaaacgcgag
ctgttggccgagcagcgggaaaagttcgtggctggttgcgtccgtcaaggctacggcgaa
gagcttggtcatcaagtgtacgatctgatcgtccgctttgccgattacggcttcaataaa
gcgcactctgtcgcctacgcggtcatcgcctaccagatggcgtatttgaaagcgacctat
ccgcttgcttttatggcagcccttttgtcgctgtcgatcggctcgcagacgagaatcgcc
gagtacacggaggaggcgcggcgcctggggcttcgcgtgctggggccggatgtcaacaaa
agcacggcgtcctttgcagtcgaacaagatgcgattcgtttcgggcttgctgccgtcaaa
aacgtcggctatggagcgatcgaatcgattgtaaaagaacgggctgtgcgtccgtatcgg
gacgttttcgatttttgcgccagagtagatgcgcgtctcgtgaacagacgagtggtagaa
tcgctgacgctctgcggggcgctggattcgctgcctggtcaccgcagccagttgctgctg
cttttggacgaggcggtcggcaagacgaatgcgaagcggatcgagcgcgacgcgaatcag
ctcgacctgtttgcgggagaagaacaagcggcgccattgcgcgagccggctgaatacccg
gaagtgccgccgatgtcacgcgcccagcagctgaaagaagaacgggaactgatcggcgtg
tacatttccggccatccgctcgaccagtatgcgcacgtggctgcccgccccgaagtgacg
gctatttcggcgctcagcgagctggcccgcgacaaaacggtgaaagtgttcggaatgatt
acggaagaaaagcgcatccagacgaaaaagggcgacccgatggcgtttttggtgctggag
gacaaaaccgcgcaggtggagctggtcgtctttccgcaagtgtttgccaagtacggcgac
ttgctcggcaaagagcggatggtcgtagccgaagcgcgggtggatcatcaggatgacatg
gtgaagctgctcgcatcgcgcttttgggatgccgagacactgcaagcgccgaccgccgag
acggtgttgtttgtcaaaatttccgcccagcaggagcacgattcgacactgcaacgtttg
caacggctgtttgtcgaaaaaaaaggaacgattcctgtgattctgttttacgagggaaaa
agacagacaattcgcctgccggaggacattcgggtcgaggtggacgagtcatttttggag
caagcgcgagatattgtgggacgtgacagcgtaatccagaaagaattgcccataaattgg
ggaggatga
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