Brevibacillus sp. HD3.3A: HP435_17005
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Entry
HP435_17005 CDS
T10166
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
breh Brevibacillus sp. HD3.3A
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breh03032
]
HP435_17005 (topA)
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_17005 (topA)
Enzymes [BR:
breh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HP435_17005 (topA)
DNA replication proteins [BR:
breh03032
]
Prokaryotic type
DNA Topoisomerases
HP435_17005 (topA)
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HP435_17005 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
UED67002
LinkDB
All DBs
Position
complement(3696870..3698948)
Genome browser
AA seq
692 aa
AA seq
DB search
MADTLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQMGVDVNHDFEPKYITIRGK
GDVLKSLKDAAKKVKKVYLAADPDREGEAIAWHLAQYLNLDLNQPLRVVFNEITKDAIKE
AFKHPRHINMDLVNAQQARRILDRLVGYNISPILWKKVRKGLSAGRVQSVTVKLIMDRER
EIQSFIPEEYWTIATKLVSNGKEFEAKFYGYGDEKVELKSEEDVKQVLDRMKDQPFVVQK
VTKRERKRNPAPPFITSSLQQEAARKLNFRTAKTMRIAQELYEGIDVGNKEGAVGLITYM
RTDSTRLSETAQNEAKEYIQEKFGADYIPAEPRVQAKKENAQDAHEAIRPTSVSRTPDEI
KEFLSRDQLRLYRLIWERFLASQMSSAVLDTMSVDIDAGGIMFRATGSKVKFPGFMKVYI
EGNDDGTEEESFLPPIDEGQTLEHQEITPAQHFTQPPPRYSEARLIKTLEEGGIGRPSTY
APTLETIQKRGYVALEEKRFIPTELGEIVITLIEEFFPEILNAEFTAHMESDLDEIEEGT
ANWVNILDAFYGGFAKRVAVAEEEMKEVELKDEESDETCELCGRVMVYKLGRFGKFLACS
GFPDCRNTKPIVKETGVKCPQCETGHIIERKSKKSRIFYGCNQYPECDFVSWDKPIARPC
PKCSSLMVEKKRKKQGVSVVCTKCDYQEEADS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgctcgtaatcgtagaatcccctgcgaaagcgaaaaccattggaaaatat
ctgggaagcaaatatatcgtgaaagcgtccatgggtcatgtgcgcgacctcccgaaaagc
cagatgggggtagatgtcaatcatgactttgaacccaaatacataacgattcgcggcaag
ggcgatgtactcaagagcttgaaggatgccgccaaaaaagtgaaaaaagtttatctggct
gccgacccggatcgcgaaggggaagcaattgcttggcatctggcgcagtatctgaatctg
gatttgaaccagccgcttcgggttgtgttcaacgaaatcacgaaagacgcgatcaaagaa
gcgttcaagcatccgcgacacatcaacatggatttggtcaacgcccagcaagcccgccgc
attctggatcggcttgtcggttacaacatcagtccgattttgtggaaaaaagtgcgcaaa
ggcttgagtgcagggcgcgttcaatcagttacggtcaagctaatcatggatcgggaacgc
gaaattcagtcgttcattcctgaagagtattggacgattgccaccaagctcgtaagcaat
ggcaaagagtttgaagcgaagttttacggctatggggacgaaaaggtagagctgaaatcc
gaagaagatgtcaaacaagtgttggacagaatgaaggaccagccgtttgtcgtgcaaaag
gtgaccaagcgcgaacgcaaacgcaatccggctccgccgttcatcaccagctccttgcaa
caggaagcagcccgcaaactgaatttccgcacggccaagaccatgcgcatcgcccaggag
ctgtacgaggggatcgatgttggcaacaaggaaggcgcagtcggtttgattacgtatatg
cgtacagactcgacacgcttatcggaaaccgcacaaaatgaagcgaaagagtacatacag
gaaaaattcggcgctgattacataccggctgaacctcgcgtccaggccaaaaaggaaaac
gctcaggatgcgcacgaagcgattcgtcctacgtctgtgtctcgcacaccggatgaaatc
aaagaatttttgtcgcgggatcagttgcgtttgtatcgcctgatatgggaacggtttctc
gccagccaaatgtcttcggctgtactcgatacgatgagtgtggatatagatgcagggggc
atcatgttccgggcgactggctcgaaagtgaaattccctggatttatgaaggtttatata
gaaggaaacgatgacgggacagaagaagaaagcttcctgccgccgattgatgaagggcag
acccttgaacatcaagaaatcaccccggctcagcactttacgcaaccgccgccgcgatac
tccgaggcacgtcttatcaagacgctggaagaaggcggcatcggacggccttccacttat
gcgcctaccttggaaacaatccaaaagcgcggctacgtcgctttggaggaaaaacgcttt
attccgacggagttgggtgagatcgtcattactttgattgaggagtttttcccggagatt
ctcaatgcggaatttacggctcacatggagtctgatctggatgagatcgaggaaggcact
gccaactgggtcaacattctcgatgcgttctacggaggctttgccaagcgggtagccgta
gccgaggaagagatgaaggaagtcgagctgaaagacgaagagtctgatgaaacctgcgag
ctttgtggtcgcgtgatggtctacaagctcggacgttttggcaagttcctcgcttgttcc
ggcttcccggattgccggaatacgaaaccgatcgtcaaagaaaccggagtaaaatgccca
caatgtgaaaccggacacattattgaacgtaaatctaaaaagagccgtattttttacggt
tgcaaccaatacccggaatgcgattttgtatcgtgggacaaaccgattgcccgtccttgc
ccgaaatgctcaagcctgatggtagagaaaaagcgcaagaagcaaggggtcagcgtcgtc
tgcaccaaatgcgattaccaggaagaagcagactcctga
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