Brevibacillus sp. HD3.3A: HP435_19525
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Entry
HP435_19525 CDS
T10166
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
breh Brevibacillus sp. HD3.3A
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breh03019
]
HP435_19525
Messenger RNA biogenesis [BR:
breh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HP435_19525
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
UED67471
LinkDB
All DBs
Position
complement(4194764..4195714)
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AA seq
316 aa
AA seq
DB search
MTKYLLDYQEGERVVAFCLVKSKEAGVASNQSEYLNLELGDRSGTLMAKLWDVSPEMKEW
IAVKSVVKIDAAVQMYRGKKQLVIQRIRPAAESDEVLMESLIPVSPVPVDELWTKLMQTV
DSLKSDTLRAIIREALATEEISERLRQYPAGVKMHHNYYHGLLEHIVSLLSAAQSLLPLY
PQVDRDVLYATCILHDIGKLYELSDPIAPDYTTPGQLIGHLVMGVEMVSGICRKLDIPLG
DAEVLHLKHCILSHHGEVENGWGSAVSGKTPTAVLFHYLDQIDSKMNALGQTLADMGEED
EWAYAGVLRRKVWRGY
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatttgctggattatcaagagggagagagagtcgtcgccttttgcctggtg
aaaagcaaagaggctggcgtggcgagcaaccagagcgagtatttgaacctggagctgggg
gatcgctcaggcacgctcatggccaagctgtgggatgtcagccctgaaatgaaagagtgg
atcgccgtaaaatctgtggtgaaaatcgacgccgccgtccagatgtaccgcgggaaaaag
cagctggtaatccagcgcattcgcccggcagccgaatcggatgaagtgttgatggagtcg
ctgatccctgtatccccggttccggtggacgagctgtggacgaagctcatgcagacggta
gacagcttgaaaagcgacacgctgcgagcgattatccgcgaggcgttggctacggaggaa
atcagcgagcggctgaggcagtacccggcaggggtaaaaatgcaccacaattactaccac
ggactgctggaacatatcgtttccttgctgtcagcggcgcaaagcttgcttccgctctat
ccgcaggtcgatagagatgtcctctacgccacttgcatcctgcacgatatcgggaagctg
tacgagctgtcagacccgattgcgccggactacaccacgccaggccagctgatcggccat
ctggtgatgggcgtcgagatggtcagcggcatttgccgcaagctggacattccgctcgga
gacgccgaggtgcttcatctcaaacattgcattttgagtcatcatggggaagtggagaac
ggctggggaagcgccgtatccggcaagactccgacggctgtcttgttccattacctggac
cagatcgacagcaaaatgaacgcactcgggcaaacactcgccgacatgggcgaggaagac
gagtgggcgtacgcaggtgtgctcagacgaaaagtttggcgaggctactaa
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