Brevibacillus sp. HD3.3A: HP435_26870
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Entry
HP435_26870 CDS
T10166
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HP435_26870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_26870
Enzymes [BR:
breh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HP435_26870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HP435_26870
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HP435_26870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UED68819
LinkDB
All DBs
Position
5735786..5736595
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEMETYRRLLHEQICGAVITSTAVQREKTINLPPAQFGQLLQNNRLTLIERRGKHL
LFHLQSGHVLLLHLMLGGFLYLGTAEDKLARTAQVTVFLGERVLYFHGLRLGYLHLLTPD
QIDEKLAPLGPEPLNPEFTLTHFEKLLEEKRGVLKTAMVDQHWIAGIGNCYSDEICFHAR
ILPTRRIPELTAPERATLYHSMQEVLAEAIRFGGYMKQPLYRTDELTGGFDERCQVYDRG
GEPCLRCGQPIVKDELSSRKVFFCTHCQQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgaaatggaaacgtaccgcaggctgctccatgagcaaatctgcggt
gcggtcatcacctcaacagccgtccagcgggaaaaaaccatcaatctgcccccggcacag
ttcggacagcttttgcaaaacaatcgcctgacgcttatcgagcggcgcggcaagcacctc
ttgtttcacttgcaaagcggccacgtcctgctgcttcacctgatgctgggcggttttctc
tacttgggtacagccgaggacaagctcgctcggactgcccaggtaactgtctttttggga
gaacgagtgctgtattttcacggattgcggctcggttacttgcacctgctcactcccgat
cagatcgacgaaaagctggccccgctcggcccagaaccgctcaacccggagttcacgctg
acccactttgaaaagctgctggaagaaaagcgcggagttttaaaaacagccatggtcgac
caacactggatcgcaggcatcggcaactgctattccgacgaaatttgctttcacgcgcgc
atactgcctacgcgccgcatccccgaactgactgcgccagagcgagccactctctatcat
tccatgcaggaagtgcttgcagaagcgattcgttttggcggttacatgaaacagccgttg
tatcgcaccgacgagttgacaggcgggttcgacgagcgttgccaagtgtacgatcgcggc
ggagagccatgcctgcgttgcggacagcctatcgtaaaagacgagctatcctcgcgaaaa
gtttttttctgcactcattgccagcaataa
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