Brevibacillus sp. HD3.3A: HP435_27310
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Entry
HP435_27310 CDS
T10166
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP435_27310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breh03019
]
HP435_27310
03009 Ribosome biogenesis [BR:
breh03009
]
HP435_27310
Enzymes [BR:
breh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HP435_27310
Messenger RNA biogenesis [BR:
breh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HP435_27310
Ribosome biogenesis [BR:
breh03009
]
Prokaryotic type
rRNA helicases
HP435_27310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
AAA_19
NAT10_TcmA_helicase
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
UED68901
LinkDB
All DBs
Position
complement(5826809..5828323)
Genome browser
AA seq
504 aa
AA seq
DB search
MTTFFDFGLHHSIVRALGNMGFEEATAIQEQTVPVALQGRDLIGQAQTGTGKTAAFGIPL
VERLDENNGNIQGVVLTPTRELAVQVAEEINKIAQFKNISALPIYGGQDITRQIKALKKR
PQIIVATPGRFMDHMRRRTIRLDAIEIVVLDEADEMLNMGFIDDIKEILQEVPDNRQTLL
FSATMPRAIQEIAQQFMSEPTLISVKPKEVTVPNIEQQYMEVAEKQKFDVLCRLLDIHSP
ELAIIFGRTKRRVDELSEALTKRGYGAEGIHGDLNQAKRDSVLRKFKEGTIEVLVATDVA
ARGLDISGVTHVFNFDIPQDSESYVHRIGRTGRAGKTGLAITFVTSREIDHLRLIERATN
RRMERRSVPSMSEALEGQQRLTVEKILEASGRDDLSAYKTLAEQLLEDIDSVTLVSAALK
LLTKEPDQTPVRLTEEAPLRVGKKKAFPKGKGGYGSGSGFGSKRPPRPRGGEFRPRSGDS
RPRSGESRPRSTESSGRPYSNKQR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttgactactttttttgattttggattgcatcattctattgtgagagctcttggcaacatg
gggtttgaagaggcgacagccattcaggagcaaactgttcctgtagccttgcaaggccgc
gatttgattggacaggcgcaaacaggtacaggaaaaaccgctgctttcggtattccgctg
gttgagcgcctggatgaaaacaacggcaatattcaaggggttgtactgacgccgacccgt
gagctggctgtgcaggtagcagaggaaatcaacaaaattgcccagttcaaaaacatttcc
gctctgccaatttacggcggtcaagacattacccgccaaatcaaggcgctgaaaaagcgc
ccgcaaatcatcgtagcgacgcctggccgtttcatggaccacatgagaagaagaacgatc
cgcctcgatgcgatcgagatcgttgttctggacgaagcagatgaaatgctgaacatgggc
ttcatcgacgatatcaaggaaattttgcaagaagttcctgacaatcgtcaaaccttgctg
ttctctgcaactatgccgagagcgattcaggaaattgcccagcagttcatgagcgagccg
acgctgatttccgtcaaaccgaaagaagtaacggtgccaaacattgagcagcaatacatg
gaagttgccgagaagcaaaaattcgacgttctgtgtcgtctacttgacattcattcccct
gaattggcgatcattttcggtcgtaccaagcgcagagtggatgaactgtccgaggctctg
accaagcgcggttacggcgctgaaggaatccatggcgatttgaaccaggcaaaacgcgac
agcgtgctgcgcaagttcaaggaaggtacgatcgaagtgctggttgcgacagacgtagct
gcccgcggtctggatatcagcggcgttacgcacgttttcaacttcgacattccgcaagac
tcggaaagctacgttcaccgtatcggccgtactggtcgtgccgggaagactggtcttgcc
atcacgtttgtcacttcccgcgagatcgaccacctgcgtctgatcgagcgcgcgacaaac
cgccgtatggagcgtcgttctgtgcctagcatgagcgaagcgctggaaggtcaacaacgt
ttgaccgtggagaaaattttggaggcgtcaggccgcgatgacttgagcgcctacaaaaca
ttggccgagcaattgctggaagatatcgattccgtgacgctcgtatctgctgcactcaag
ctgctgaccaaagagccggatcaaactccggttcgcctgacagaagaagcgcctctgcgt
gtcggcaagaaaaaagcgttcccgaaaggcaaaggcggatacggttctggctccggcttt
ggaagcaaacgcccacctcgtccacgcggtggagagttccgtcctcgcagcggcgattcc
cgtccgcgcagtggagaatctcgcccacgcagcacagagtccagcggaagaccatacagc
aacaaacaacgataa
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