Brevibacillus sp. HD3.3A: HP435_27470
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Entry
HP435_27470 CDS
T10166
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
breh Brevibacillus sp. HD3.3A
Pathway
breh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP435_27470 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breh03019
]
HP435_27470 (recQ)
03400 DNA repair and recombination proteins [BR:
breh03400
]
HP435_27470 (recQ)
Enzymes [BR:
breh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP435_27470 (recQ)
Messenger RNA biogenesis [BR:
breh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HP435_27470 (recQ)
DNA repair and recombination proteins [BR:
breh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HP435_27470 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UED68931
LinkDB
All DBs
Position
complement(5870120..5871895)
Genome browser
AA seq
591 aa
AA seq
DB search
MLHKAQEVLQKYFGYETFREGQKKIIESLLEGHDTVGIMPTGGGKSICYQVPAMLFDGVT
IVISPLISLMKDQVDVLVSMGIAATQINSSLDYSEVRERLRMAARGEYKLLYIAPERLES
ESFQQLIRNMPISFIAVDEAHCVSQWGHDFRPSYLEIARFLDTLPERPIVAALTATATPE
VTADIKRQLSLADERLFITGFGRDNLILSVRKGENRREFIQSYLKANRQQAGIIYAATRK
DVDALHADLAKRGFPVTKYHAGLSEEERAANQEAFLFDDVRTMVATNAFGMGIDKSNVRY
VIHYNMPKNLEAYYQEAGRAGRDGEPSECILLYQPQDIQTQSFFIEQNQLTDERKDHEYK
KLYAMVDYCRTPRCLQQYIVQYFGEADAPECGRCHNCTDETELSDITLEAQKIFSCVKRM
RERFGAALVAQVLKGSKNKKVTQLQFDQLPTYGLMKEYKEKEIADLIQLLIAEGYLQVTE
SQYPIVKLGERALPVLMGEERVVQKISIRPVALTEDDELFEQLRTLRKEISQKEGVPPYV
IFHDSTLKEMSSLCPTDKQAMLKIKGVGESKFDKYGQLFLECLQNYAAVKP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcataaagcgcaagaagttttgcaaaaatactttggctacgaaacatttcgcgag
ggacaaaagaaaattatcgaaagcctcctggaaggacacgacacggtaggcatcatgccg
acgggcgggggaaaatcaatctgctaccaggttccggcgatgctttttgacggggtaacc
atcgtcatctcgccgctcatttccttgatgaaggatcaggttgacgtactggtcagcatg
gggattgccgctacgcaaatcaacagctcgctcgattacagcgaggtgcgggagcgactg
cggatggctgcgcgcggcgaatacaagctgctctacattgccccggaacggctcgaatcg
gaatcttttcaacaactgattcggaatatgccgatttccttcatcgctgtcgatgaggcg
cactgtgtctcccagtgggggcatgatttccgcccaagctatctggaaatcgcccgtttt
ttggacacgctgccagagcgtccgatcgtcgctgccttgactgcgacagcgacaccggaa
gtaaccgctgatatcaagcgccagctgtcgcttgcagacgagcggcttttcatcacgggc
tttggcagggacaacctcatcctgtccgtgcgcaaaggggaaaatcgccgcgagttcatc
caatcttatttgaaggcgaacagacagcaggccggaattatttacgctgcgacgagaaaa
gacgtcgatgcccttcatgccgatctggcaaagcgcggctttccggtcaccaaataccac
gccggactgtcagaggaagagcgtgctgccaatcaggaagctttcctgttcgacgacgtt
cgcacgatggttgccaccaatgcgttcggaatgggaatcgacaagtccaacgtgcgctat
gtcattcattacaacatgccgaaaaacctggaggcgtactatcaggaggccgggcgcgcc
gggcgtgacggcgagccgagcgagtgcattttgctgtaccagccgcaggatattcagacc
cagtcgtttttcattgagcaaaaccagctgacggacgagcgcaaggatcacgagtacaaa
aagctctacgccatggtcgattactgccggacgccgaggtgtttgcagcagtatatcgtg
cagtatttcggggaagccgatgccccggagtgcggccgctgccacaactgcaccgatgag
acagagctgagcgacatcacgctcgaagcgcaaaaaatcttttcctgcgtgaagcgcatg
cgggaacgcttcggcgcggcactggtcgcacaggtgctcaaaggctcgaaaaacaaaaag
gtgacccagctccaatttgatcagcttcccacgtacggtctgatgaaggagtacaaggaa
aaagaaattgccgacctgatccagctgctgatcgcggaagggtacttgcaggtgacagag
agccaatacccgatcgtcaagctgggagagcgggcattgcccgttttgatgggcgaagag
cgcgtcgtgcaaaaaatctcgatccgtccggttgctctcacggaagatgacgagctgttc
gaacagctgcgaacgctgcgcaaagaaatctcgcaaaaagaaggcgtgccgccgtacgtc
attttccacgacagcactttgaaggaaatgagcagcctttgcccgactgacaaacaggcc
atgctcaagatcaaaggtgtgggcgaatccaaattcgacaagtacgggcagctcttcctt
gagtgcttgcaaaactacgctgccgtcaagccgtga
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