Brevibacterium sp. JSBI002: LJ362_03940
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Entry
LJ362_03940 CDS
T10795
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brej Brevibacterium sp. JSBI002
Brite
KEGG Orthology (KO) [BR:
brej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brej03032
]
LJ362_03940 (topA)
03400 DNA repair and recombination proteins [BR:
brej03400
]
LJ362_03940 (topA)
Enzymes [BR:
brej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LJ362_03940 (topA)
DNA replication proteins [BR:
brej03032
]
Prokaryotic type
DNA Topoisomerases
LJ362_03940 (topA)
DNA repair and recombination proteins [BR:
brej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJ362_03940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UZD63011
UniProt:
A0A9E7W578
LinkDB
All DBs
Position
902855..905704
Genome browser
AA seq
949 aa
AA seq
DB search
MTTTEKKPRRLVIVESPTKARTIVGYLGDGYDVEASVGHIRDLPTPSELPADMKKGPYGK
FAVDVDNNFDPYYRIDPGKKKKVTELKRLLKDADELYLATDEDREGEAIAWHLLEVLKPK
IPVKRMVFHEITPEAIERALENTRDIDSSLVDAQETRRILDRLYGYEVSPVLWRKIRAGL
SAGRVQSVATRLVVERERERMAFVPADYWDLDIDLGLPDGTNPFAANLTTLDGSRVASGR
DFNDKGELKNTSATIVDQARAESLATELNGSAKDALTVTAVESKPYSRRPAAPFTTSTLQ
QEAGRKLRMSARQAMRTAQSLYEHGYITYMRTDSSALSGQAIAAARKQVTELYGPEFVPQ
SPRQYASKQKSAQEAHEAIRPAGDSFRTPAQVSKQLNGDEFRLYDLIWKRTVASQMADAK
GKTATIKVSAALADGHEAGFSASGTVITFRGFLAAYEEGQDASRYDTKSGESRLPQVEEG
QSLSVVKAEADGHTTAPPPRFTEASLVKQLEELGIGRPSTYAATISVIQDRGYVTTRGNA
LVPSWLAFSVVRLLEEHFAGLVDYAFTADLESELDRIAMGEEDRNDWLAGFYFGDKTQDR
EGLKAIVDDLGDIDAREVNTVAISEGVNLRVGRYGPYLEVASEKDGEDPKRVSVPDDLAP
DELTAAKAAELIESQGDGDRELGVDPETGHTIVAKNGRFGPYVSEVLPEPEEKPKRGAKK
PKPRTGSLFKSMDLNSIDLETALKLLSLPRVVGQDEEGTDITAQNGRYGPYLKKGTDSRS
LTDEEQIFNITLEEALKIYSEPKQRGGRRAAAPLKELGEDPETKKPVVVKDGRFGPYVTD
GETNATLRKDDSVEAVTLERAATLLAEKRAKGPAKKKAPAKKAPAKKTTAKKTTAAKTTA
AKKTTASKSTASKSTAAKKTTASKSPASKATASKTTAAKKTSTAKPKTP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacaaccgagaagaagccccgtcgcctcgtcatcgtcgagtctccgacgaaggcg
cgaacgattgtgggatacctcggcgacggttacgacgtcgaggcctctgtcggtcatatc
cgcgacctgcccaccccttcggagctgcccgccgatatgaagaaggggccgtacggaaag
ttcgctgtcgacgtcgacaacaacttcgatccctattatcggatcgatccgggcaagaag
aagaaggtcaccgaactcaagcgtctgctcaaggacgccgacgaactctatctggcaacg
gatgaggaccgcgagggagaggccatcgcctggcatctgctcgaagtcctcaaaccgaag
attccggtcaagcgcatggtcttccacgagatcacgcctgaggcgatcgaacgggccctg
gagaacacccgcgatatcgattcctcgctcgtcgacgcgcaggagacccgccgcatcctc
gaccgtctctacggctacgaggtctcacccgtgctgtggcgcaagatccgtgccgggctc
tcggccggacgtgtgcagtccgtggccacccgcctcgtcgtcgaacgcgaacgcgaacgc
atggccttcgtgcccgctgactactgggacctcgatatcgatctcggtctgccggatggg
acgaacccgttcgctgcgaatctcaccacactcgacggatcgcgggtggccagcggccgt
gacttcaacgacaagggcgagctgaagaacacctcggcgacgatcgtcgaccaggcgcga
gcggaatcgttggccacggagctgaacggcagcgccaaggatgcgctgacggtgaccgcg
gtggagtcgaagccgtactcccggcgcccggccgcacccttcacgacctcgaccctgcag
caggaagccggacgcaaactgcgcatgagcgctcgtcaggccatgcgcaccgctcagtcg
ctgtacgagcacggctacatcacctatatgcgtaccgactcctcggcgctgtcgggtcag
gccatcgctgccgcccgcaagcaggtgaccgaactctacggtcccgaattcgttccgcag
tcgccgcgccagtacgcgagcaagcagaaatcggcgcaggaggctcacgaggcgatccgt
cccgccggtgactccttccgcaccccggcacaggtgtccaagcagctcaacggagacgag
ttccgtctctacgacctcatctggaagcgcaccgtcgccagccagatggccgacgcgaag
ggcaagaccgcgacgatcaaggtcagcgctgctctcgccgacggccacgaggccggtttc
agcgccagcggcaccgtcatcaccttccgcgggttccttgccgcctatgaagagggccag
gacgcgtcccgctacgacacgaagtccggagagtcgcggctgccgcaggtcgaagagggc
caatcgctctcggtcgtcaaggccgaagccgacggccacaccaccgctccgccgccgcgc
ttcaccgaagccagtctggtcaagcagctcgaagagctcggcatcggccgaccctcgacc
tatgctgcgacgatctccgtcatccaggaccgcggctatgtgacgactcgcggcaacgca
ttggtgcccagctggttggcgttctccgtcgtccgcctgctcgaagagcacttcgccggt
ctggtcgactatgcgttcaccgctgatctcgaatccgaactcgaccggatcgcgatgggc
gaggaggatcgcaacgactggttggccggattctacttcggtgacaagacccaggaccgt
gaaggactcaaagccatcgtcgacgacctcggcgatatcgatgcccgcgaggtcaacacc
gtcgccatcagcgaaggtgtgaacctgcgtgtgggccgctacggtccctacctcgaagtc
gcctcggagaaggacggagaggacccgaagcgggtctccgtccccgacgatctggcaccc
gatgagctgacagcggcgaaggccgccgaactcatcgaatcccaaggcgacggcgaccgc
gagctcggcgtcgacccggagaccggacacaccatcgtggcgaagaacggtcgtttcgga
ccctatgtctccgaggtgctgcccgaacccgaggagaagccgaagcggggcgcgaagaag
ccgaagccgcgcacaggttccctgttcaagtcgatggatctgaactcgatcgacctcgaa
accgcgctcaagctgctcagcctgcctcgcgtagtcggtcaggacgaagagggcacggac
atcaccgcgcagaacggccgctacggaccgtacctgaagaagggaaccgactcccgctcc
ctgaccgatgaggagcagatcttcaacatcaccctcgaagaggcgctgaagatctactca
gagccgaagcagcgcggcggtcgtcgggccgcagcaccgctgaaggaactcggcgaggac
ccggagacgaagaagcccgtcgtcgtcaaggacggtcgcttcggaccgtatgtcaccgat
ggtgagacgaatgcgaccctgcgcaaggacgactccgtcgaagccgtgacgctcgaacgc
gccgcgactctgctcgctgagaagcgcgcgaagggaccggcgaagaagaaggctccggcg
aagaaggcccccgccaagaagacgactgcgaagaagacgacggcagccaagacgacagcc
gcgaagaagaccactgcgtcgaagtcaacagcgtcgaagtccaccgcagcgaagaagacg
acggcttccaagtcgcctgcgtcgaaggccaccgcttccaagacgacagcggcgaagaag
acgagcacggccaagccgaagactccctga
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