Brevibacterium sp. JSBI002: LJ362_05210
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Entry
LJ362_05210 CDS
T10795
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brej Brevibacterium sp. JSBI002
Pathway
brej03420
Nucleotide excision repair
brej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LJ362_05210
03430 Mismatch repair
LJ362_05210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brej03400
]
LJ362_05210
Enzymes [BR:
brej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJ362_05210
DNA repair and recombination proteins [BR:
brej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJ362_05210
MMR (mismatch excision repair)
Other MMR factors
LJ362_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
nSTAND_NTPase5
DEAD
AAA_25
ResIII
DUF8079
Motif
Other DBs
NCBI-ProteinID:
UZD63241
LinkDB
All DBs
Position
complement(1160843..1163377)
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AA seq
844 aa
AA seq
DB search
MTAAAEHTDHAAGADSRAAELLTGLNPRQREAVIHTGSPLLIVAGAGSGKTTVLTRRIAY
ALATGRAHPGEVLAITFTNKAAKEMAERVSQIVGPASRAMWVSTFHSSCVRILRREAKVL
GMKSNFTIYDAQDAQRLVAQILKELGLDTKKYAPRAILHRISNLKNDLQTPDDFIPRPNN
PADEVLADVFKRYTSRLRLANAFDFDDLIAETVHLFGAFPEVADSYRRRFRHILVDEYQD
TNPAQYALIKALAGDGAGGPTGAELTVVGDADQSIYAFRGATVRNIVEFEKDFPNADTIL
LEQNYRSTQNILDAANAVIANNDDRREKKLWTSEGSGEQIIGWVAENEQGEARFVVDRID
DLIDEEKYTYGDFAVFYRTNAQSRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLRV
VANPDDDVNLRRILNVPKRSIGDRTEGIIADFADRENISFFTALGRLDEIPHLSSRALTS
VQRFYDLMQDLRSTAESSPLSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAE
DFVATREAAAVAEPDTADDTDTDGGTDTEATAAPEPRDTETETAAEAVDPDGDEAGSADA
STPPGVGAAAIDQFLEQVALASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGG
FPHSRSFENPQELSEERRLAYVGLTRARQRLLVTRAETRSMWGQPQYNPPSRFLSEIPEN
LINWENTGSFSGGFGSGGFGSGGYSSGYSGGSRSFGSSRSSGTGSRSRSNASSSTPVAGF
PNRIRPNREVISVEVGEKVSHESFGLGTVTEVNGVGDKTVAVVDFGSAGSKRLLLRYAPI
EKLS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagctgaacacaccgaccacgccgccggcgccgactcccgggcggccgaa
ctcctcactggactcaaccccaggcagcgcgaggccgtgatccatacgggatcaccgttg
ctcatcgtcgccggggccggatcgggcaagacgaccgtgctcacccgacgcatcgcctac
gccttggccaccggtcgcgcccaccccggcgaagtcctggcgatcacgttcacgaacaag
gctgcgaaagagatggccgaacgcgtgtcccagatcgtcggccctgcctcccgggccatg
tgggtctcgaccttccactcctcgtgtgtgcgcatcctccgccgcgaggcgaaggtgctg
ggcatgaagtcgaatttcacgatctacgacgcccaggatgcgcagcgactcgtcgcccag
atcctcaaggagctcggcctcgacacgaagaagtacgccccgcgggccatcctgcaccgg
atctcgaacctcaagaacgatctgcagaccccggacgacttcatcccgcggcccaacaat
cccgccgatgaggtgctcgccgacgtcttcaagcgctacacctcccgtctgcgcctggcc
aatgccttcgacttcgacgacctcatcgcggagaccgttcacctcttcggcgccttcccc
gaggtggccgattcctaccgtcgccggttccgccatatcctcgtcgacgagtaccaggac
acgaaccccgcacagtacgccctgatcaaggccctggccggtgacggcgcaggagggccg
acgggcgccgaactcaccgtcgtcggcgacgccgaccagtcgatctatgccttccgcggc
gccacggtgcgcaacatcgtcgagttcgagaaggacttcccgaacgcggacaccattctg
ttggagcagaactaccggtcgacgcagaacatcctcgacgcagccaatgccgtgatcgcg
aacaacgacgaccgccgcgaaaagaagctgtggacctcggaaggttccggcgagcagatc
atcggctgggtcgccgagaacgaacagggtgaagcccggttcgtcgtcgaccgcatcgat
gacctcatcgacgaggagaagtacacctatggtgacttcgctgtgttctaccgcacgaac
gctcagtcgcgcgccatcgaagatgcgctggtccgttccggaatcccgtacaaggtcgtc
ggcggcacccgcttctacgagcgcaaggagatcaaggacgccctcgcctacctgcgcgtg
gtcgccaaccccgatgacgacgtcaatctgcgccgcatcctcaatgtgcccaaacgctcc
atcggcgaccgcaccgagggcatcatcgccgacttcgccgaccgggagaacatcagcttc
ttcaccgcgctgggccgcctcgacgagatccctcatctgagttcgcgcgccctgacgtcg
gtgcagaggttctacgacctcatgcaggatctgcgctccaccgccgagtcctccccgctc
tcgcgggtcatcgaggcgatcctcgaacagtccgggtacctcgaatcgctgcagaagagc
accgatccgcaggacgaatcccgtgtcgacaacctcgccgaactcgtcgccgtggccgag
gatttcgtcgccactcgggaggctgccgcggttgcggaaccggacaccgcggatgacacc
gacacagacggcggcaccgacaccgaggcgaccgccgccccggaacccagagacacagaa
accgaaaccgccgctgaggcggtcgaccccgacggtgatgaggccggttccgccgacgcc
tccacgcccccgggcgtcggagctgccgccatcgatcagttcctcgaacaggtggctctg
gcctcggacactgatcagatccccgatgccgaactcggtcaggtcacgctgatgactctg
cacacagccaagggactcgagttcccggtggtcttcctcaccgggctcgaagacggagga
ttcccgcattcgcgttccttcgagaatccgcaggagctgtcggaggagcggcgtctggcg
tatgtcgggctcacgcgcgcacggcagcgcctgctcgtcactcgcgccgagactcggagc
atgtggggtcagcctcagtacaatccgccgagccggttcctgtccgagatcccggagaac
ctcatcaattgggagaacacgggcagcttctccggcgggttcggttccggaggtttcggc
tccggcggctattcgtccggatactcgggaggatcacgaagcttcgggtcatcgcggtcg
tccggcaccggctcccgctcacgttcgaatgcgagttcgtcgacaccggtcgccggattc
cccaaccggatccggcccaatcgtgaggtcatctccgtcgaggtcggcgagaaggtctcg
cacgagtccttcgggctcggcaccgtcaccgaagtcaacggcgtcggagacaagaccgtg
gccgtcgtcgacttcggttcggccgggtcgaagcggctgctgctgcgctacgccccgatc
gaaaagctcagctga
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