Brevibacterium sp. JSBI002: LJ362_09380
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Entry
LJ362_09380 CDS
T10795
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
brej Brevibacterium sp. JSBI002
Pathway
brej03030
DNA replication
brej03430
Mismatch repair
brej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJ362_09380 (holA)
03430 Mismatch repair
LJ362_09380 (holA)
03440 Homologous recombination
LJ362_09380 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brej03032
]
LJ362_09380 (holA)
03400 DNA repair and recombination proteins [BR:
brej03400
]
LJ362_09380 (holA)
Enzymes [BR:
brej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJ362_09380 (holA)
DNA replication proteins [BR:
brej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJ362_09380 (holA)
DNA repair and recombination proteins [BR:
brej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJ362_09380 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UZD60919
LinkDB
All DBs
Position
complement(2036913..2037896)
Genome browser
AA seq
327 aa
AA seq
DB search
MAVKKTLIPWSSAKPAPVVMISGGESVLVRMAKDRIVSAARKQDPEEIEFDAAGYQAGEL
AMAASPSLFSSSKLIVVDAVEKCSEDFLSDALAYLDAPNDDAVVVLLHAGGNRGAKLIKK
LDSAGFPRIDAAVLKNESDRAKFAQTRFKTAKRRIDEAGMAALMSALGSDLAELNAGVDQ
LIEDTEGTITAEVVDQYYGGRVEATGFKVADAAVAGDAKSALSLLRHALSTGSDPVPLVA
AVAMKLRGMAKVQGFSGTSGELASELKMAPWQVDRARREVRRWNEVALGQSLIAAAEADA
AVKGGGRDPVYAVEWFVSEVARLAKTR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagaagaccctgatcccgtggagctcggcgaaaccggcccctgtcgtcatg
atctccggtggcgaatcggtgctcgtgcgcatggccaaggaccgcatcgtgtcggccgca
cggaaacaggatcccgaagagatcgaattcgacgctgccggataccaggccggcgagttg
gcgatggcggcttcaccgtctctgttctcctcctcgaagctgatcgtcgtcgatgcggtc
gaaaagtgctcggaggacttccttagtgacgctttggcctatctggacgctccgaacgat
gacgccgtcgtggtgctgctgcacgccggcggcaaccggggagcgaagctcatcaagaaa
ctcgactccgccggttttccccgcatcgacgcggcggtgctgaagaacgaaagcgatcgg
gcgaagttcgcccagacccggttcaagaccgcgaagcggcgcatcgacgaagcggggatg
gccgcgctcatgtcggcgctgggctctgatctcgccgaactcaatgccggagtcgaccag
ctcatcgaagacaccgagggcacgatcaccgccgaggtcgtcgaccagtactacggcggt
cgggtcgaggccacaggcttcaaggtcgccgatgcggcagtcgcaggcgacgcgaagagc
gcgctcagtctgctcaggcatgccctgtcgacggggtccgatccggtcccgctggtggcg
gcagtcgcgatgaagctgcgcggtatggcgaaggtgcagggattctccggcaccagcggg
gagctggcctccgagttgaagatggctccgtggcaggtcgaccgggcccgccgggaggtg
aggcggtggaacgaggtggcgctcggccagtcgctcatcgccgcggccgaggccgatgcg
gccgtcaagggcgggggacgcgatccggtctacgccgtcgaatggttcgtctcagaagtc
gcccgcctagccaaaacccgctaa
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