Brevibacterium sp. JSBI002: LJ362_11475
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Entry
LJ362_11475 CDS
T10795
Name
(GenBank) helicase-related protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
brej Brevibacterium sp. JSBI002
Brite
KEGG Orthology (KO) [BR:
brej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brej03019
]
LJ362_11475
Enzymes [BR:
brej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LJ362_11475
Messenger RNA biogenesis [BR:
brej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LJ362_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
AAA_22
AAA_11
AAA_19
ParA
ResIII
UvrD-helicase
Helicase_RecD
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UZD61302
UniProt:
A0A9E7W0H7
LinkDB
All DBs
Position
2517226..2520039
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AA seq
937 aa
AA seq
DB search
MPDQHVPHTFDLARIGADLPAAALIDELDLAEAAPAPRLVVEAPPGTGKTTVVPPMIAEH
LTGTGRIIVTQPRRMAARAAARRLASLTGTRLGEVVGFTVRGESRSSRATQIEFVTTGVL
LSRLLRDPELTGVAGVILDEAHERQLDTDLAFAMCRELADLREDLALVVMSATLDAQLWA
ARLGDGQQAPATMLSVAADTHPLEVRWAPAKERPLDARGVTWDFLDHLAATTVRALTDTG
EGDVLVFAPGAREVDEVASRVRRLVESGGGSGASGGPFGSGGSGTGDVVEVHTLTGRTPA
KEQDAILRPRTDQERGRRVIVSTSVAESALTIDGVRIVVDSGLSRGPRLDTRRRMSGLVT
VRESKASGTQRSGRAARQGPGVAYRCMSEADWASLPEHTPPEIATSDLTSAVLALAVWGG
DDTLLPDPLPAGPKRQAVDNLMAIGAVDVTGGYPGDRDSDAGERGGAAAPDLPISALRVT
ETGRAIAAVPASVWSARGLLDGAALLSPARAAEAVAVIESDQRAPGADLSALLRQLRRSR
DARFAQDRKRFASIAREFASSGDGGDTGDDGGNGGIGDRAEVTGGSGTALTPEDLGLVTA
LSYPLQIARLRSASDSEYLLASGTAASLPRDSSLQGSPWLAIAEVGLVGSRAIIRSAVPI
DVDTAELAGAGLLHTEETATFESGKVRAVRHSRLGGIELTSTPIQAGPELARRAIAESVR
ERGAREVLRPSEAFESLRARLGLLRAVFGEPWPEVTWEHLSVTLDQWCPEALDRIAKGSD
PARVDLTSALRTLLPWPEAARLDELAPTHIEVPSGSAIRLEYPDPDLVEPGTTSDADEEA
TAAPERTELPGPILAVKLQECFGWTDVPRVCDGRVAVTLHLLSPARRPLAVTSDLASFWA
NAYAHVRAENRGRYPKHPWPDDPLTAPAAKGTKRSGR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcagcacgtcccgcacaccttcgatctcgcccgcatcggggccgacttgccc
gccgccgcgctcatcgatgagctggacctcgccgaggcggctcccgccccaagattggtc
gtggaggctcctcccggaaccggtaagaccaccgtggtgccgccgatgatcgctgagcac
ctgactggtacgggccgcatcatcgtcacacagccccgccggatggcggcccgcgccgca
gccaggcggctggcgtctctgacggggacccgcctcggcgaggttgtcggtttcaccgtc
cgcggagagtcgcggagctcgcgggccacacagatcgagttcgtcaccacgggcgtgctt
ctgtcccggctgctgcgcgatccggagctgaccggagtcgccggggtcattctcgacgag
gcgcatgagcgacagttggatacggatctcgcgttcgcgatgtgccgggaattggcggat
ctgcgtgaggatctggcgctcgtcgtcatgtccgcgaccctggatgcacagctgtgggcc
gcgcgcctcggcgacggtcagcaggcaccggcgaccatgctgtcggtggccgccgatact
catcctctggaagtccggtgggcaccggcgaaggagcggccgctcgatgcacggggtgtg
acctgggattttctcgatcatctggccgcgacgacggtgcgtgcgttaactgataccggc
gagggcgatgtcctcgtcttcgctcccggtgcacgcgaagtcgacgaggtggcctcccgc
gtgcggcgcctcgtggagtcgggtggcggttcgggagccagtggtggaccgttcggctct
ggtggttcgggcaccggtgacgtggttgaggtgcataccttgacgggtcgaacccctgcg
aaggagcaggacgcgatcctgcgcccgcgcaccgaccaggagcgcggccgacgcgtcatc
gtctccacctcggtggcggagtcggcgctgacgatcgacggagtccgcatcgtcgtcgat
tcgggactctctcggggaccacggctggatacgcggcgacgcatgtccgggctggtcacg
gtgcgggagtcgaaggcgtcgggaacacagcgctccggtcgagctgcgcggcagggtccg
ggtgtcgcgtatcggtgcatgtcagaggctgattgggcgagcctgcccgagcacactcct
cccgaaatcgcgacctccgatctcacctccgcagtgctcgctctcgctgtgtggggcggc
gacgacaccctgctgcccgatccgctgccggccggaccgaagcggcaggcggtcgacaat
cttatggcgatcggggccgtcgacgtgaccggcggttaccccggcgaccgcgactccgac
gccggcgagcgcggcggcgcggcagcccctgaccttccgatctccgctctgcgcgtaacc
gagaccggtcgggcgatcgcggcggttcccgcctcggtgtggtcggcgcgtggcctcctc
gacggggctgcgctgctctcacccgcgcgtgcggcagaagcggtcgccgtcatcgaatcc
gatcagagggctcccggcgccgatctctccgctctgctgcggcagctgcggcgcagcagg
gatgctcgattcgctcaggaccgcaaaaggttcgcgtcgatcgcacgggagttcgcctcc
agcggcgatggcggcgacacgggagacgacggagggaacggcggaatcggcgaccgtgct
gaagtcaccggcggttccggcacagcgctgactcccgaggacctcgggctcgtcacggcg
ctgtcctatcccctgcagatcgcgcgtctgcgcagcgcctccgattccgaatacctgctc
gcctccggcacggcggcgagcctgccccgagactcctcactgcagggcagcccatggttg
gccatcgccgaggtgggcctggtcggatcgcgggcgatcatccgatcagctgtccccatc
gacgtcgacaccgcggaactcgccggagccgggctgctgcacacggaggagacggcgacg
ttcgagtccgggaaggttcgtgcggttcgacacagccgcctcggcggaatcgaactgacc
tccaccccgattcaggccggccctgaactcgcccgccgtgccatcgccgaatcggtgcgc
gaacgtggagcccgcgaggttctgcgtccctccgaggctttcgaatcgctgcgggccaga
ctcggtctcctccgcgcggtcttcggcgaaccgtggccggaggtgacgtgggagcacctg
tcggtcacgctcgatcagtggtgtccggaggcgctcgaccggatcgcgaagggctccgac
cctgctcgcgtggatctcacatctgcgctgcgcactctgttgccatggcccgaagcggcc
cggctcgatgagttggccccgacccatattgaggtgcccagcggttccgcgatccgtctc
gagtacccggatcccgatctcgtcgaaccaggcaccacttccgacgcggacgaggaggcg
acggccgcacccgagcgcaccgagctcccgggcccgatcctcgcagtcaaactccaggag
tgcttcggctggaccgatgtgcctcgcgtctgcgacgggcgggtggcggtcaccttgcac
ctgctctcccccgccaggcggcccttggcggtgaccagcgatctcgcctctttctgggcg
aacgcatatgcccatgtccgggccgagaaccggggccgctacccgaagcatccgtggccg
gacgacccactcaccgcacctgcggcgaagggcacgaagcgctccggtcgctga
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