Brevibacterium sp. JSBI002: LJ362_14960
Help
Entry
LJ362_14960 CDS
T10795
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brej Brevibacterium sp. JSBI002
Pathway
brej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJ362_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brej03019
]
LJ362_14960
03400 DNA repair and recombination proteins [BR:
brej03400
]
LJ362_14960
Enzymes [BR:
brej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJ362_14960
Messenger RNA biogenesis [BR:
brej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LJ362_14960
DNA repair and recombination proteins [BR:
brej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LJ362_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
MRFAP1
Pribosyltran
HEM4
MarR_2
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UZD61944
UniProt:
A0A9E7VZN9
LinkDB
All DBs
Position
complement(3296314..3298452)
Genome browser
AA seq
712 aa
AA seq
DB search
MTESTPTSPPLAGSPGAPDDFAIEAQRILAELTANPNAQFRDGQLESIRDLVQAKKRVLV
VQRTGWGKSAVYFVATRMLRASGTGPSLIISPLLALMRDQIAAAERAGVRAASLNSSNVT
EWDSVLEDLKAGSLDVLLVSPERLNNPQFRDEVLPQLLAFLGLIVVDEAHCISDWGHDFR
PDYRRIGRILSELPRDTPVLATTATANSRVVTDVAEQLGDDTTVVRGELARDSLRLGVLP
GLDASARIAWLASHLGDFTGSGIVYTLTVSAAEDITRMLREQGHEVRAYTGRTDAEERAE
LEQQLKDNRIKALVATSALGMGFDKPDLGFVIHIGAPSSAVAYYQQVGRAGRATDSADVL
LLPGAEDEQIWEYFATASMPNQDDANAVLAALAEADGPLSVARLETLVGTKRSRLNLLLK
TLEVEDAVSKVKGGYVSTGLGWTYDRERYEKVAAVRAEEAQAMLDYEATEQCRMEFLIRQ
LDDPDPKPCGRCDNCAGVWFSAEISDEQRQAAAGNLHKIGLPIEPRSTWPSGLANIGVPL
KGRIPAEELAEEGRAIARLSDLGQGQTLRSFLAPDAPDAEVPGQIGKWCLEVLAQWEWRT
RPEVVVSIPSNRRPVTVRSLGANLAVAGRLVDGGELLQVGDHGTPDVNSAFRVKDLYEAF
VVPPEVEEAVAGKSVLLVDDEVVSRWTMTVCARLLRQAGATSVLPFALALRA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatccaccccgacatccccgcctcttgcaggctcgcccggcgcccctgacgat
ttcgcgatcgaggcgcagcgcatcctcgccgaactcaccgcaaacccgaacgcgcagttc
cgcgacggccagctcgagtcgatccgcgacctcgtgcaggcgaagaagcgcgtcctcgtc
gtccagcgcaccggctggggcaagtccgccgtgtacttcgtcgccactcggatgctccga
gcctcaggcaccgggccgagcctcatcatctccccgctgctggcgctcatgcgcgaccag
atcgccgcggccgaacgtgccggagtccgtgccgccagcctcaattcctcgaacgtcacc
gaatgggattccgtgctcgaggacctcaaggccggcagcctcgacgttctcctcgtctcc
ccggagaggctgaacaatccgcagttccgcgacgaagtgctgccgcagctgctggccttc
ctcggcctcatcgtcgtcgacgaagcccactgcatctccgactggggccacgatttccgc
cccgactaccgtcgcatcggccggatcctgtccgaactgcctcgcgatactccggtgctc
gcgacgacagcgaccgcgaactcccgcgtcgtcaccgacgtcgccgaacagctcggcgac
gacaccaccgtcgtccgcggcgaactcgctcgcgattccctgcgcctcggtgtcctcccc
gggctcgacgcgagtgcccgcatcgcctggctggcctcccatctgggcgacttcaccggg
tccgggatcgtctacacgctcaccgtctccgccgccgaggacatcacccgaatgctgcgc
gaacagggccacgaagttcgcgcctatacgggccggaccgatgcagaagaacgcgcggag
ctcgagcagcagctcaaggacaatcggatcaaggcgctggtggccacctcggcgctcggc
atgggattcgacaaacccgacctcggtttcgtcatccatatcggcgcgccgtcgtcggcc
gtggcctactaccagcaggtcggtcgcgccggccgcgccacggactccgccgatgtcctc
ctgttgcccggcgcagaagacgaacagatctgggagtacttcgcgaccgcatcgatgccg
aaccaggacgatgcgaacgccgtgctcgccgccctcgccgaggcggacggccccctctcc
gtggcccgcttggagaccttggtcggaaccaaacgctcccgactcaacttgctgctcaag
accctcgaagtcgaagacgcggtgtcgaaggtcaagggcgggtacgtctcaaccgggctg
gggtggacctacgaccgggaacggtacgaaaaggtcgcggccgtccgcgccgaagaggcc
caggccatgctcgattatgaggcgacagagcagtgccggatggagttcctcatccgtcag
ctcgacgatcccgacccgaaaccctgcggtcgttgcgacaactgtgcgggagtgtggttc
tctgccgagatctccgacgaacagcgccaagcggcggccggtaacctgcacaagatcggt
ctaccgatcgagccgcgcagcacctggcccagcggcctggccaacatcggggtcccgctc
aaaggtcgaatccctgctgaagagctcgccgaggagggacgtgccatcgcccgcctgtcc
gacctcgggcaggggcagaccctgcggtcgttcctcgcgcctgacgctcccgacgccgag
gtgcccggtcagatcggcaagtggtgtcttgaagtactggcgcagtgggaatggagaaca
cggcccgaggtggtcgtgtcgatcccgagcaatcgccgtcccgtgacggtgcggtctctg
ggcgcgaatctcgccgtggccggtcggctcgtggacggtggtgagctgctgcaggtcggc
gaccacggcacacctgatgtcaacagtgccttccgcgtcaaggacctctacgaagccttc
gttgttcctccggaggtcgaggaggcagtggccgggaagtcagtgctgctcgtcgacgac
gaggtcgtctcgcggtggacgatgacggtgtgcgcacggttgctccggcaggcaggagct
acctcggtgctgccgttcgcgctcgctctgcgggcctga
DBGET
integrated database retrieval system
