Bremerella sp. P1: PSR63_00595
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Entry
PSR63_00595 CDS
T09589
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
brem
Bremerella sp. P1
Pathway
brem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR63_00595 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brem03021
]
PSR63_00595 (rho)
03019 Messenger RNA biogenesis [BR:
brem03019
]
PSR63_00595 (rho)
Transcription machinery [BR:
brem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PSR63_00595 (rho)
Messenger RNA biogenesis [BR:
brem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSR63_00595 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_22
NACHT
AAA
AAA_25
Mor
Motif
Other DBs
NCBI-ProteinID:
WDI42442
LinkDB
All DBs
Position
137963..139147
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AA seq
394 aa
AA seq
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MPRNNLENEEFEPGEPIPLEPGYGLLEMHPNGYGFLRSPANNFARERTDPFVPGTMIERY
GLREGVMIRGMIQRFRRGQGPRLRDVFDVDGMLPDDYLNVKSFEELTPVNPSEHLKLEYD
GGPLTNRVVDLLTPLGKGQRALIVAPPRTGKTMLLQNISRGISANHQDVKLVVLLIDERP
EEVTEMQRSVKGEVIASSLDRDIESHVRLSQLVIERCKRLAESGQDVFLLLDSITRLARA
FNKWVGDNRGNSAIMSGGINVKAMDIPKKLFATARSFEEGGSLTIVGTALVDTGSKMDEV
IFQEFKGTGNMELVLDRKLADRRVWPAIDISQSGTRREELLLTEEALNAVVALRRTLTSM
HHIDAMEQLTKQLGKYENNDQFISLIANSRDRYQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgtaacaatcttgaaaatgaagaatttgaaccaggggaacccattccactggaa
cctggctacggccttctcgagatgcatcccaacggctacggcttcttacgcagccctgcc
aataacttcgctcgcgaacgtaccgatcctttcgtgcccggcacgatgatcgaacgttac
ggacttcgcgaaggggtgatgattcgcggcatgattcaacgtttccgccgtggacaaggt
cctcgcctgcgagatgtcttcgacgtcgacggcatgctgccggatgattacctgaacgtc
aaatcgttcgaagaattgactccggtcaatccttccgagcatctcaagctggaatacgat
gggggtcctctgacgaaccgcgtcgttgaccttcttacgccactgggcaaaggccaacgt
gcgttgattgtcgctccaccgcgaaccggtaagaccatgctgctgcagaacatcagccgt
ggtatttccgccaaccaccaagacgtcaagctggtggtccttctgatcgacgaacgtccg
gaagaagtgaccgaaatgcagcgtagcgtgaagggtgaagtgatcgccagtagcttggat
cgcgacatcgaaagtcatgtgcgtctttcgcaactcgtgatcgaacgctgcaagcgtctg
gccgaatcaggccaggatgttttcctgctgttggactcgattacccgtttggctcgtgcg
ttcaataaatgggtcggcgacaaccgtggcaacagcgctatcatgtccggcggtatcaac
gtcaaagcgatggacattcctaagaagttgtttgccaccgctcgttcctttgaagaaggt
ggttcgctcaccatcgtcggtaccgctctggtcgacaccggcagcaagatggacgaagtg
atcttccaagagttcaagggtaccggcaacatggaactggtcctcgatcgcaagttggcc
gaccgccgcgtctggccggcaatcgatatttcgcagtcgggtacccgtcgcgaagaactg
ctgctgaccgaggaagctcttaatgctgttgtcgccttgcgacgtacgctgacctcaatg
catcatatcgatgcgatggaacagttgaccaagcagttgggcaagtacgagaacaacgat
cagttcatcagcctgattgccaacagtcgcgatcgttatcagtaa
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