Bremerella sp. P1: PSR63_01975
Help
Entry
PSR63_01975 CDS
T09589
Name
(GenBank) DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
brem
Bremerella sp. P1
Pathway
brem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSR63_01975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brem03021
]
PSR63_01975
03400 DNA repair and recombination proteins [BR:
brem03400
]
PSR63_01975
Enzymes [BR:
brem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSR63_01975
Transcription machinery [BR:
brem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSR63_01975
DNA repair and recombination proteins [BR:
brem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSR63_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_1
TPR_2
TPR_19
TPR_14
TPR_6
TPR_16
TPR_17
TPR_12
TPR_7
TPR_8
ANAPC3
TPR_CcmH_CycH
TPR_11
TPR_9
TPR_10
MIT
TPR_MalT
TPR_Slam
HEAT_Nup120
SAM_EPH
TPR_NUP120_160
HAT_PRP39_C
Motif
Other DBs
NCBI-ProteinID:
WDI42713
LinkDB
All DBs
Position
complement(487432..488763)
Genome browser
AA seq
443 aa
AA seq
DB search
MIQGIDFDLKSVVLTNSSFGPEEIRQILRTVGRDYNAFSTLRDSVSELEGQSEERSPATN
VRLGVCQFIMGNYSGAVQTLSAADGGALAHYYLGRSYFCMQDFDKAIEAFQSAQTAGYNK
DDCQLGIIESLRSKGDSEQALQMLDNMFGPIESTANYLYQRGATIASLGGNPAEVVALYE
RAVEADPGHAGALFGLALENDRRGNDAMALQLYQNAAAVFPTHVGALLNLGLLHEDRGEY
DRATHCYQRVLDSYPTEKRARMYMKDAQASGDMYYDEEEQKKRDRMSQVLSIPVTDFELS
VRSRNCLQKMGIMTLGDLCRCSEQELLASKNFGETSLIEIRDMLRSKGLELGQMSNEKPS
TPEVSYDTSGLSPDEQALLDRPIAELSLSVRARKCMVRLGISTIGELVRRTGDELLECKN
FGVTSLNEVREKLTSYNLKLRGD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaggaatcgatttcgaccttaagagcgttgttctcacgaactcttccttcggt
ccggaggaaattcgtcagatcctgcgaaccgtaggacgcgactacaacgctttctcgacg
cttcgcgacagcgtttccgaattggaaggccagtcggaagaacgttcgccggccaccaac
gttcggttgggcgtgtgccagttcatcatgggtaactacagcggtgccgttcaaacgctt
tcggccgccgacggtggagccctagcccactactacctgggtcgcagctacttctgcatg
caagacttcgacaaggcgatcgaagccttccagtccgctcagactgctggttacaacaaa
gacgattgtcagctaggcatcatcgagtcgcttcgcagcaagggcgattccgagcaggcc
ctgcagatgctggacaacatgttcggcccgatcgaatcgaccgctaactacctgtatcag
cgtggtgctacgatcgcttcgctgggcggtaacccggcggaagtggttgctctttacgag
cgagccgtggaagcggatcctggtcacgctggggctctcttcggtctggctttggaaaac
gatcgtcgcggtaacgacgcgatggccttgcagctttaccagaatgctgccgccgttttc
ccaacccacgtcggtgctcttttgaaccttggtttgctgcacgaagatcgtggtgaatac
gatcgtgcgacgcactgctaccagcgcgttctcgattcgtatccgaccgagaagcgagct
cgtatgtacatgaaggatgcccaagcatctggtgacatgtactacgacgaagaagaacaa
aagaaacgcgaccgcatgtcgcaggttctcagcattccggttaccgacttcgaattgtcg
gtccgcagccggaactgcctgcagaagatgggcatcatgaccctcggcgacctgtgccgc
tgctcggagcaagagcttctggcaagtaagaacttcggcgaaacgtcgctgattgaaatt
cgcgatatgctgcgttccaagggcctggaattgggccagatgtcgaacgaaaagccatcg
acgcctgaagtcagctacgacacctcggggctctcgccagacgaacaggctctgctggat
cgtccgattgccgagctcagcttgtcggttcgtgcccgcaagtgcatggttcgcttgggt
atctcgaccatcggcgaactggttcgacgcaccggcgacgaacttctcgaatgcaagaac
ttcggtgtgaccagcttgaacgaagttcgcgagaagctgacttcctacaatctgaagctt
cgcggcgactaa
DBGET
integrated database retrieval system
