Bremerella sp. P1: PSR63_03230
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Entry
PSR63_03230 CDS
T09589
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brem
Bremerella sp. P1
Pathway
brem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR63_03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brem03019
]
PSR63_03230
03016 Transfer RNA biogenesis [BR:
brem03016
]
PSR63_03230
Enzymes [BR:
brem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSR63_03230
Messenger RNA biogenesis [BR:
brem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSR63_03230
Transfer RNA biogenesis [BR:
brem03016
]
Prokaryotic type
tRNA degradation factors
PSR63_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WDI42956
LinkDB
All DBs
Position
complement(777709..779958)
Genome browser
AA seq
749 aa
AA seq
DB search
MEEIRVEKQIGNETLSLTTGFLAKQAHGAVLVQYGETVVFVATVTGPSRPGTDFFPLTCD
YRERTAAAGKFPGGFIKREGRPTTKEILSSRLMDRPIRPMFPKGYHDEVQIQASVVASDR
MHDGDVLAMNGASAALCISHMPFQGPLAAVRLGRVDGELVVFPSFEQLEQSDLDLIISGS
KDSVLMIEGFSREIPEDEMADAIMKAHEVVKEICDLQIELTEKAGKEKMEYAEPDDGGLY
QKLMDSYYADLKSAKQTTGKQDRADKVRELKTKVKEELIPDPAAEGAIDEGAFGTAWHDL
EERVVRDLILSGTRTDGRDAKSLRGIECKVDVLPRVHGSAVFQRGETQSLITVTLGTPRD
EQRVDGLIDEYSKKFMLDYNFPSFSVGECRPIRGPGRREIGHGALAERSVNPVLPPAEDF
PYTVRVISDILESNGSSSMASVCGATLGLMAAGVPITNPVAGISIGLVKEGDDFVLLTDI
LGEEDHHGDMDFKVAGTQNGITGIQLDLKIKGINEEIIRKTLVQAREARIEILRKMLTTI
SQPKDEPSKWAPRMMRTKINPEKIGLLIGPGGKTIRAIQEETGATLDVEDDGTVIVASGN
LEWAEAAMARVQAITGEVEVGKIYEGRVTSVKDFGAFVEILPGRDGLCHISELSTEYVSD
VNSVVKVGDMLAVKVLLVDEHDRVKLSHKATLPGGDAPAGEGDEELETAGSRGGDRGGRG
GERRDRGDRGGDRGGRGGDRGRRRPRRED
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaaattcgtgtagagaagcagatcggcaatgaaaccttatcccttacaactggc
tttctagccaagcaagcccacggggcagtgctcgtacaatacggcgagacggttgttttt
gtcgccaccgtcaccggcccatctcggcctgggactgacttctttcccctgacctgtgat
taccgcgagcgaaccgctgctgctggtaagttccctggtggtttcatcaagcgagaaggt
cgccctaccaccaaagaaattctctcgtcgcgcctgatggatcgtccgatccgcccgatg
ttccccaagggttaccacgacgaagttcagattcaagccagcgtggttgccagcgatcga
atgcacgacggtgacgtgcttgccatgaatggtgcctcggccgcgctttgcatctcgcac
atgccgttccaaggtcctttggctgccgttcgcttgggccgtgtcgatggcgaactggtt
gtgttcccctcgttcgagcaactggaacaaagcgatctcgatctgatcatctcgggtagc
aaggattcggtcttgatgatcgaaggtttctcgcgagaaatccccgaagacgagatggcc
gacgcgatcatgaaggcccacgaagtggtcaaggaaatctgcgacctgcagatcgagctg
accgaaaaggccggcaaagaaaagatggagtacgccgagccagacgatggtggtctctat
cagaagctgatggattcgtactatgcggacctgaaatcggccaagcaaaccaccggcaag
caagatcgtgccgacaaggttcgcgaactgaagaccaaggtcaaggaagaactgattcca
gatccagccgccgaaggtgcgatcgacgaaggtgcgttcggtactgcctggcatgacctg
gaagaacgcgttgtgcgtgatctgatcctcagtggtacccgtaccgatggtcgtgacgcg
aagagcttgcgtggcatcgaatgcaaggtcgacgttctgccacgcgttcacggttccgcc
gtcttccaacgtggtgaaacccaatcgctgatcaccgttaccctgggtaccccacgtgac
gaacagcgtgtcgacggtttgatcgacgagtactcgaagaagttcatgctcgactataac
ttccctagcttctcggtgggtgaatgtcgtccgattcgtggcccaggccgtcgtgaaatt
ggtcacggtgctttggctgaacgtagcgtgaacccggttctgccgcctgccgaagacttc
ccctacacggtacgtgtgatctccgacattctcgaatccaacggctccagctcgatggct
tcggtctgtggtgcgaccctcggtctgatggccgctggcgtgccgatcaccaacccggtt
gccggtatctcgatcggcctggtgaaggaaggggacgacttcgtcctgctgaccgacatc
ctgggcgaagaagatcaccatggcgacatggacttcaaggtcgctggtacccagaacggt
atcaccggcatccagttggacctcaagatcaaggggatcaacgaggaaatcatccgcaag
acgctggttcaggctcgcgaagcccgaatcgagatccttcgcaagatgctgaccaccatc
agccagccgaaggacgagccatcgaagtgggctccgcgcatgatgcgaaccaagatcaac
ccagaaaagatcggcttgctgatcggtcctggcggcaagacgattcgtgccattcaggaa
gaaaccggcgcgacgctcgacgtcgaagacgacggtaccgtgattgttgccagtggcaac
ttggaatgggctgaagccgccatggctcgcgttcaggccatcaccggtgaagtcgaagtc
ggcaagatctacgaaggccgcgtcacgagcgtgaaggacttcggtgcattcgtcgaaatc
ctcccaggccgcgacggcttgtgccacatcagcgaactgtcgaccgaatacgtttcggac
gtcaacagcgtggtcaaggtcggtgacatgctggccgtgaaggtcctgctggtcgacgag
cacgaccgcgttaagctgagccacaaggctaccttgccaggcggcgatgccccagccggc
gaaggtgacgaagaactcgaaaccgctggctcgcgtggcggtgaccgaggcggacgtggc
ggtgaacgccgtgaccgtggcgaccgtggtggtgatcgcggaggccgaggcggtgaccgc
ggacgccgacgtcctcgtcgtgaagactaa
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